BLASTX nr result

ID: Cimicifuga21_contig00030457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030457
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510608.1| conserved hypothetical protein [Ricinus comm...    52   6e-09
ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|2...    51   6e-09
ref|XP_002510609.1| conserved hypothetical protein [Ricinus comm...    50   3e-08
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    43   3e-08
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    43   8e-08

>ref|XP_002510608.1| conserved hypothetical protein [Ricinus communis]
           gi|223551309|gb|EEF52795.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 52.0 bits (123), Expect(2) = 6e-09
 Identities = 27/46 (58%), Positives = 31/46 (67%)
 Frame = -2

Query: 138 FFNLSDNKAYRLEFPEVIGKGKRCWGSPHGWLVILHEDGPLFSLLN 1
           F+NL+D K Y LE PE I K  RC GS HGWLV++ ED P   LLN
Sbjct: 67  FYNLADGKTYHLELPETIEK--RCCGSSHGWLVMV-EDTPSIFLLN 109



 Score = 33.1 bits (74), Expect(2) = 6e-09
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -3

Query: 236 SNLPKNPRHLPTQLPWLLLPHFTN 165
           S +PK P  L  QLPWLLLP+  N
Sbjct: 37  SAIPKKPHDLLCQLPWLLLPYHKN 60


>ref|XP_002300676.1| predicted protein [Populus trichocarpa] gi|222842402|gb|EEE79949.1|
           predicted protein [Populus trichocarpa]
          Length = 305

 Score = 50.8 bits (120), Expect(2) = 6e-09
 Identities = 24/44 (54%), Positives = 29/44 (65%)
 Frame = -2

Query: 138 FFNLSDNKAYRLEFPEVIGKGKRCWGSPHGWLVILHEDGPLFSL 7
           F+NL+D K YRLE PE   K  RC GS HGWLV++ E   +F L
Sbjct: 67  FYNLADGKTYRLELPEAYEK--RCCGSSHGWLVMVEETPAIFLL 108



 Score = 34.3 bits (77), Expect(2) = 6e-09
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = -3

Query: 239 RSNLPKNPRHLPTQLPWLLLPH 174
           RS LPK P  L  QLPWLLLP+
Sbjct: 36  RSALPKKPHDLLCQLPWLLLPY 57


>ref|XP_002510609.1| conserved hypothetical protein [Ricinus communis]
           gi|223551310|gb|EEF52796.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 406

 Score = 50.4 bits (119), Expect(2) = 3e-08
 Identities = 26/46 (56%), Positives = 30/46 (65%)
 Frame = -2

Query: 138 FFNLSDNKAYRLEFPEVIGKGKRCWGSPHGWLVILHEDGPLFSLLN 1
           F+N SD K Y LE PE + K  RC GS HGWLV++ ED P   LLN
Sbjct: 67  FYNPSDGKTYHLELPETVDK--RCCGSSHGWLVMV-EDTPSIFLLN 109



 Score = 32.3 bits (72), Expect(2) = 3e-08
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -3

Query: 236 SNLPKNPRHLPTQLPWLLLPH 174
           S +PK P  L  +LPWLLLPH
Sbjct: 37  SAIPKKPHDLLCRLPWLLLPH 57


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 42.7 bits (99), Expect(2) = 3e-08
 Identities = 22/47 (46%), Positives = 29/47 (61%)
 Frame = -2

Query: 141 SFFNLSDNKAYRLEFPEVIGKGKRCWGSPHGWLVILHEDGPLFSLLN 1
           +FFNLS  K + L  PE   + K C GS HGWL+IL +D P   ++N
Sbjct: 68  AFFNLSTYKFHSLNLPEASHRKKHC-GSSHGWLIIL-DDSPSILVIN 112



 Score = 40.0 bits (92), Expect(2) = 3e-08
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = -3

Query: 239 RSNLPKNPRHLPTQLPWLLLP 177
           +S++PK P HLP QLPWLLLP
Sbjct: 37  KSSIPKTPNHLPPQLPWLLLP 57


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 43.1 bits (100), Expect(2) = 8e-08
 Identities = 23/47 (48%), Positives = 31/47 (65%)
 Frame = -2

Query: 141 SFFNLSDNKAYRLEFPEVIGKGKRCWGSPHGWLVILHEDGPLFSLLN 1
           +FF+LS NK + L  PEV  + + C GS HGWL+IL +D P   L+N
Sbjct: 69  AFFSLSTNKFHFLNLPEVSYRKRHC-GSSHGWLMIL-DDTPTILLIN 113



 Score = 38.1 bits (87), Expect(2) = 8e-08
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -3

Query: 239 RSNLPKNPRHLPTQLPWLLLP 177
           R ++PK P HLP QLPWL+LP
Sbjct: 37  RFSIPKTPNHLPPQLPWLMLP 57


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