BLASTX nr result

ID: Cimicifuga21_contig00030443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030443
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus ...    56   3e-06

>ref|XP_002513467.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223547375|gb|EEF48870.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 464

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
 Frame = -2

Query: 212 ERCKFVRWVDWILQLDYSPVIESFRLQFHMNKDFADLIDQWISMAIAKSVQRFDIDLSHF 33
           ER  FV WV+ +L+    P +E  R+ F ++ DF   ID WI++A+ K V+R +IDL++ 
Sbjct: 99  ERHSFVSWVNQVLRSHEGPTMEGLRICFDLDSDFMYEIDSWITIAMQKRVKRLEIDLTNI 158

Query: 32  YP-WPDRGSYA 3
            P     GSYA
Sbjct: 159 EPSIKTTGSYA 169


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