BLASTX nr result

ID: Cimicifuga21_contig00030442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030442
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein A...    60   2e-07
ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812...    60   2e-07
ref|XP_003521927.1| PREDICTED: uncharacterized protein LOC100811...    60   2e-07
ref|XP_002513242.1| hypothetical protein RCOM_1761740 [Ricinus c...    59   7e-07
ref|XP_002518868.1| conserved hypothetical protein [Ricinus comm...    57   2e-06

>ref|XP_003521929.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 192

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
 Frame = +2

Query: 269 PSRFGILWNPPPDGKHKFNVDG-FVLASGAAGTGFVLKDSRGAFFLGFAQPFW-LISALL 442
           P+R  + W PPP G  K N DG F +       G VL+D +G F LGF+       SAL 
Sbjct: 24  PTRL-VWWTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALE 82

Query: 443 AETWAVWLALMTAVALEMKDIIIELDCQALFLILSA 550
           AE WA+ + + T VA   +++I+E D      I++A
Sbjct: 83  AELWAIKIGMQTVVARGYRNLIVESDSLKAIQIINA 118


>ref|XP_003521928.1| PREDICTED: uncharacterized protein LOC100812157 [Glycine max]
          Length = 551

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
 Frame = +2

Query: 269 PSRFGILWNPPPDGKHKFNVDG-FVLASGAAGTGFVLKDSRGAFFLGFAQPFW-LISALL 442
           P+R  + W PPP G  K N DG F +       G VL+D +G F LGF+       SAL 
Sbjct: 122 PTRL-VWWTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALE 180

Query: 443 AETWAVWLALMTAVALEMKDIIIELDCQALFLILSA 550
           AE WA+ + + T VA   +++I+E D      I++A
Sbjct: 181 AELWAIKIGMQTVVARGYRNLIVESDSLKAIQIINA 216


>ref|XP_003521927.1| PREDICTED: uncharacterized protein LOC100811627 [Glycine max]
          Length = 445

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
 Frame = +2

Query: 269 PSRFGILWNPPPDGKHKFNVDG-FVLASGAAGTGFVLKDSRGAFFLGFAQPFW-LISALL 442
           P+R  + W PPP G  K N DG F +       G VL+D +G F LGF+       SAL 
Sbjct: 122 PTRL-VWWTPPPRGFFKLNCDGAFTVYGNKGAAGGVLRDWKGEFILGFSDALIECSSALE 180

Query: 443 AETWAVWLALMTAVALEMKDIIIELDCQALFLILSA 550
           AE WA+ + + T VA   +++I+E D      I++A
Sbjct: 181 AELWAIKIGMQTVVARGYRNLIVESDSLKAIQIINA 216


>ref|XP_002513242.1| hypothetical protein RCOM_1761740 [Ricinus communis]
           gi|223547616|gb|EEF49110.1| hypothetical protein
           RCOM_1761740 [Ricinus communis]
          Length = 213

 Score = 58.5 bits (140), Expect = 7e-07
 Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
 Frame = +2

Query: 284 ILWNPPPDGKHKFNVDGF-VLASGAAGTGFVLKDSRGAFFLGFAQPFWLISALLAETWAV 460
           + W PPPDG  K N DG   +ASG A +G V+K+++GA+  GF       ++L AE WA 
Sbjct: 133 LCWKPPPDGTMKVNTDGERSIASGVASSGDVIKNAQGAWIAGFRHRISCCTSLCAELWAT 192

Query: 461 WLALMTAVALEMKDI 505
              L  A+ +  K+I
Sbjct: 193 ITGLEMAILMGFKNI 207


>ref|XP_002518868.1| conserved hypothetical protein [Ricinus communis]
           gi|223541855|gb|EEF43401.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 186

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
 Frame = +2

Query: 284 ILWNPPPDGKHKFNVDGFVLASGAAG-TGFVLKDSRGAFFLGFAQPFWLISALLAETWAV 460
           + WNPPP    K N DG V  S   G  G +++D+ G +  GF+    L S   AE W V
Sbjct: 35  LCWNPPPSSFFKLNTDGVVHQSSGHGYVGGLIRDTNGRWVAGFSINISLCSITCAELWGV 94

Query: 461 WLALMTAVALEMKDIIIELDCQAL 532
           +  LM A  L + ++++E+D  A+
Sbjct: 95  YQGLMLANRLGIVNLMVEVDSMAV 118


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