BLASTX nr result

ID: Cimicifuga21_contig00030434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030434
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, ...   125   7e-27
emb|CBI18302.3| unnamed protein product [Vitis vinifera]              125   7e-27
emb|CAN68615.1| hypothetical protein VITISV_023389 [Vitis vinifera]   125   7e-27
ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, ...   122   1e-25
ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, ...   122   1e-25

>ref|XP_002266551.2| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial [Vitis
           vinifera]
          Length = 564

 Score =  125 bits (315), Expect = 7e-27
 Identities = 68/156 (43%), Positives = 96/156 (61%), Gaps = 4/156 (2%)
 Frame = +3

Query: 3   ERFLSLIPFLMSIEMECLENASESKS----SVTSRQRIMAGMFLREIGXXXXXXXXXXXX 170
           E+F+SLIPF+ S E   +  A          VTS+ RI+ G+ LREI             
Sbjct: 405 EKFISLIPFIESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTL 464

Query: 171 XXXXXXXCCEEAFPETCSELDRILQLYRNVENTIVELGLDKVWEMKPLVNGKEIISVLKL 350
                     +   +   +LD+  +++  VEN IV LGL++VWE+KPLVNGK+I++VL+L
Sbjct: 465 LYPNDINHTRD-ISKNNFQLDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQL 523

Query: 351 KAAGPLVGEWKKHSVEWQLAHPSGTAEECLDWMMQE 458
           K+ GPLV +W++  ++WQLAHPSGTAEECLDWM Q+
Sbjct: 524 KSGGPLVRDWQQKLIQWQLAHPSGTAEECLDWMRQK 559


>emb|CBI18302.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  125 bits (315), Expect = 7e-27
 Identities = 68/156 (43%), Positives = 96/156 (61%), Gaps = 4/156 (2%)
 Frame = +3

Query: 3   ERFLSLIPFLMSIEMECLENASESKS----SVTSRQRIMAGMFLREIGXXXXXXXXXXXX 170
           E+F+SLIPF+ S E   +  A          VTS+ RI+ G+ LREI             
Sbjct: 360 EKFISLIPFIESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTL 419

Query: 171 XXXXXXXCCEEAFPETCSELDRILQLYRNVENTIVELGLDKVWEMKPLVNGKEIISVLKL 350
                     +   +   +LD+  +++  VEN IV LGL++VWE+KPLVNGK+I++VL+L
Sbjct: 420 LYPNDINHTRD-ISKNNFQLDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQL 478

Query: 351 KAAGPLVGEWKKHSVEWQLAHPSGTAEECLDWMMQE 458
           K+ GPLV +W++  ++WQLAHPSGTAEECLDWM Q+
Sbjct: 479 KSGGPLVRDWQQKLIQWQLAHPSGTAEECLDWMRQK 514


>emb|CAN68615.1| hypothetical protein VITISV_023389 [Vitis vinifera]
          Length = 240

 Score =  125 bits (315), Expect = 7e-27
 Identities = 68/156 (43%), Positives = 96/156 (61%), Gaps = 4/156 (2%)
 Frame = +3

Query: 3   ERFLSLIPFLMSIEMECLENASESKS----SVTSRQRIMAGMFLREIGXXXXXXXXXXXX 170
           E+F+SLIPF+ S E   +  A          VTS+ RI+ G+ LREI             
Sbjct: 81  EKFISLIPFIESTESIQISEAEWGIEILDLPVTSKLRILTGLLLREIKGFWRVALMVSTL 140

Query: 171 XXXXXXXCCEEAFPETCSELDRILQLYRNVENTIVELGLDKVWEMKPLVNGKEIISVLKL 350
                     +   +   +LD+  +++  VEN IV LGL++VWE+KPLVNGK+I++VL+L
Sbjct: 141 LYPNDINHTRD-ISKNNFQLDKRRKVFEMVENAIVGLGLEEVWELKPLVNGKDIMNVLQL 199

Query: 351 KAAGPLVGEWKKHSVEWQLAHPSGTAEECLDWMMQE 458
           K+ GPLV +W++  ++WQLAHPSGTAEECLDWM Q+
Sbjct: 200 KSGGPLVRDWQQKLIQWQLAHPSGTAEECLDWMRQK 235


>ref|XP_004171177.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
           [Cucumis sativus]
          Length = 577

 Score =  122 bits (305), Expect = 1e-25
 Identities = 69/156 (44%), Positives = 95/156 (60%), Gaps = 5/156 (3%)
 Frame = +3

Query: 3   ERFLSLIPFLMSIEMECLENASE-----SKSSVTSRQRIMAGMFLREIGXXXXXXXXXXX 167
           E+FLSLIP L+S E E   N  +     +    TSR R++ G+ LREI            
Sbjct: 414 EKFLSLIPLLVSKE-EIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALLMAT 472

Query: 168 XXXXXXXXCCEEAFPETCSELDRILQLYRNVENTIVELGLDKVWEMKPLVNGKEIISVLK 347
                     ++       EL++  +L+ +V N IV+LGL+ VWEMKPLVNGKEI+++L+
Sbjct: 473 LLYPADVDYAQDLLNRHF-ELEKRKELFDDVYNEIVKLGLENVWEMKPLVNGKEIMNILQ 531

Query: 348 LKAAGPLVGEWKKHSVEWQLAHPSGTAEECLDWMMQ 455
           LKA GPLV EW++  + WQLAHPSGT+EECLDW+ +
Sbjct: 532 LKAGGPLVREWQQKILAWQLAHPSGTSEECLDWIRE 567


>ref|XP_004140936.1| PREDICTED: CCA tRNA nucleotidyltransferase, mitochondrial-like
           [Cucumis sativus]
          Length = 577

 Score =  122 bits (305), Expect = 1e-25
 Identities = 69/156 (44%), Positives = 95/156 (60%), Gaps = 5/156 (3%)
 Frame = +3

Query: 3   ERFLSLIPFLMSIEMECLENASE-----SKSSVTSRQRIMAGMFLREIGXXXXXXXXXXX 167
           E+FLSLIP L+S E E   N  +     +    TSR R++ G+ LREI            
Sbjct: 414 EKFLSLIPLLVSKE-EIQPNGVDWGVECADVPATSRIRVLTGLLLREIKDFWPVALLMAT 472

Query: 168 XXXXXXXXCCEEAFPETCSELDRILQLYRNVENTIVELGLDKVWEMKPLVNGKEIISVLK 347
                     ++       EL++  +L+ +V N IV+LGL+ VWEMKPLVNGKEI+++L+
Sbjct: 473 LLYPADVDYAQDLLNRHF-ELEKRKELFDDVYNEIVKLGLENVWEMKPLVNGKEIMNILQ 531

Query: 348 LKAAGPLVGEWKKHSVEWQLAHPSGTAEECLDWMMQ 455
           LKA GPLV EW++  + WQLAHPSGT+EECLDW+ +
Sbjct: 532 LKAGGPLVREWQQKILAWQLAHPSGTSEECLDWIRE 567


Top