BLASTX nr result

ID: Cimicifuga21_contig00030433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030433
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|2...   168   4e-40
ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinu...   165   4e-39
ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228...   164   5e-39
ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220...   164   5e-39
ref|NP_001154232.2| regulator of chromosome condensation repeat-...   149   2e-34

>ref|XP_002311672.1| predicted protein [Populus trichocarpa] gi|222851492|gb|EEE89039.1|
           predicted protein [Populus trichocarpa]
          Length = 1109

 Score =  168 bits (426), Expect = 4e-40
 Identities = 79/122 (64%), Positives = 96/122 (78%), Gaps = 1/122 (0%)
 Frame = -3

Query: 364 AFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDPCYAKLKTAEDASIST 185
           AFGFTRKRHNCYNCGLVHCH CSSKKA++AALAPTPGKPHRVCD CYAKLK AE  + S 
Sbjct: 625 AFGFTRKRHNCYNCGLVHCHNCSSKKAMKAALAPTPGKPHRVCDSCYAKLKAAESGNTSA 684

Query: 184 VTRTSVTPRKSVDNRERFDVKSTEPSKILLSPCMEPVKYLEIKSEKHG-KTDSLSVIRAS 8
           + R +  PR+S+D RE+ +      S+ILLSP  EP+KYLEIKS K G ++++ S++RAS
Sbjct: 685 INRKTTVPRRSMDIREKMERGEPRFSRILLSPTTEPIKYLEIKSGKQGAQSEAASIVRAS 744

Query: 7   LV 2
            V
Sbjct: 745 QV 746


>ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223526683|gb|EEF28920.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 1097

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/122 (63%), Positives = 97/122 (79%), Gaps = 1/122 (0%)
 Frame = -3

Query: 364 AFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDPCYAKLKTAEDASIST 185
           AFGFTRKRHNCYNCGLVHCHACSSKKAL+AALAPTPGKPHRVCD CYAKLKT++  + + 
Sbjct: 625 AFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYAKLKTSDTGNYN- 683

Query: 184 VTRTSVTPRKSVDNRERFDVKSTEPSKILLSPCMEPVKYLEIKSEKHG-KTDSLSVIRAS 8
           + R + TPR+S+D RE+ D      S+ L SP  EP+KYLEIKS + G ++++ S++RAS
Sbjct: 684 INRKATTPRRSIDIREKMDRGEANTSRTLFSPSTEPIKYLEIKSVRPGMRSEAPSIVRAS 743

Query: 7   LV 2
            V
Sbjct: 744 QV 745


>ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
           sativus]
          Length = 958

 Score =  164 bits (416), Expect = 5e-39
 Identities = 82/122 (67%), Positives = 93/122 (76%), Gaps = 1/122 (0%)
 Frame = -3

Query: 364 AFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDPCYAKLKTAEDASIST 185
           AFGFTRKRHNCYNCGLVHCH+CSSKKAL+AALAPTPGKPHRVCD CYAKLK+AE  +   
Sbjct: 488 AFGFTRKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKPHRVCDSCYAKLKSAEAGNNFC 547

Query: 184 VTRTSVTPRKSVDNRERFDVKSTEPSKILLSPCMEPVKYLEIKSEKHG-KTDSLSVIRAS 8
           V R     R+S D +ERFD     PS+ILLSP  EPVKY EIKS + G +  S S++RAS
Sbjct: 548 VNRKLTANRRSTDYKERFDRGDVRPSRILLSPTTEPVKYHEIKSVRPGSRPTSPSMVRAS 607

Query: 7   LV 2
            V
Sbjct: 608 QV 609


>ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  164 bits (416), Expect = 5e-39
 Identities = 82/122 (67%), Positives = 93/122 (76%), Gaps = 1/122 (0%)
 Frame = -3

Query: 364 AFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDPCYAKLKTAEDASIST 185
           AFGFTRKRHNCYNCGLVHCH+CSSKKAL+AALAPTPGKPHRVCD CYAKLK+AE  +   
Sbjct: 626 AFGFTRKRHNCYNCGLVHCHSCSSKKALKAALAPTPGKPHRVCDSCYAKLKSAEAGNNFC 685

Query: 184 VTRTSVTPRKSVDNRERFDVKSTEPSKILLSPCMEPVKYLEIKSEKHG-KTDSLSVIRAS 8
           V R     R+S D +ERFD     PS+ILLSP  EPVKY EIKS + G +  S S++RAS
Sbjct: 686 VNRKLTANRRSTDYKERFDRGDVRPSRILLSPTTEPVKYHEIKSVRPGSRPTSPSMVRAS 745

Query: 7   LV 2
            V
Sbjct: 746 QV 747


>ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana] gi|332658030|gb|AEE83430.1|
           regulator of chromosome condensation repeat-containing
           protein [Arabidopsis thaliana]
          Length = 1106

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/122 (63%), Positives = 87/122 (71%), Gaps = 1/122 (0%)
 Frame = -3

Query: 364 AFGFTRKRHNCYNCGLVHCHACSSKKALRAALAPTPGKPHRVCDPCYAKLKTAEDASIST 185
           AFGFTRKRHNCYNCGLVHCHACSSKKAL+AALAPTPGKPHRVCD CY KLK  E    S 
Sbjct: 630 AFGFTRKRHNCYNCGLVHCHACSSKKALKAALAPTPGKPHRVCDACYTKLKAGESGYNSN 689

Query: 184 V-TRTSVTPRKSVDNRERFDVKSTEPSKILLSPCMEPVKYLEIKSEKHGKTDSLSVIRAS 8
           V  R S TP +S+D   R D +    S+ILLSP  EPVKY E++S +       S++RAS
Sbjct: 690 VANRNSTTPTRSLDGTGRPD-RDIRSSRILLSPKTEPVKYSEVRSSR----SESSIVRAS 744

Query: 7   LV 2
            V
Sbjct: 745 QV 746


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