BLASTX nr result

ID: Cimicifuga21_contig00030411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030411
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18982.3| unnamed protein product [Vitis vinifera]              220   8e-56
ref|XP_002284567.1| PREDICTED: cyclin-A1-1-like [Vitis vinifera]      220   8e-56
ref|XP_002306649.1| predicted protein [Populus trichocarpa] gi|2...   215   3e-54
ref|NP_001233762.1| cyclin A1 [Solanum lycopersicum] gi|5420274|...   211   7e-53
gb|AAN87004.1| cyclin A [Populus alba]                                209   1e-52

>emb|CBI18982.3| unnamed protein product [Vitis vinifera]
          Length = 550

 Score =  220 bits (561), Expect = 8e-56
 Identities = 107/115 (93%), Positives = 112/115 (97%)
 Frame = +1

Query: 1   SGNAMNRQRLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNYLK 180
           SGN MNRQ+LQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYFKEEVLQMES+VLNYLK
Sbjct: 349 SGNVMNRQQLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYFKEEVLQMESSVLNYLK 408

Query: 181 FEMTAPTAKCFLRRFVHAAQGNNEVPSLQLECLANYVAELSLLEYNMLCYSPSLI 345
           FEMTAPTAKCFLRRFV AAQG NEVPSLQLECLANY+AELSLLEY+MLCY+PSLI
Sbjct: 409 FEMTAPTAKCFLRRFVRAAQGMNEVPSLQLECLANYIAELSLLEYSMLCYAPSLI 463


>ref|XP_002284567.1| PREDICTED: cyclin-A1-1-like [Vitis vinifera]
          Length = 495

 Score =  220 bits (561), Expect = 8e-56
 Identities = 107/115 (93%), Positives = 112/115 (97%)
 Frame = +1

Query: 1   SGNAMNRQRLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNYLK 180
           SGN MNRQ+LQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYFKEEVLQMES+VLNYLK
Sbjct: 294 SGNVMNRQQLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYFKEEVLQMESSVLNYLK 353

Query: 181 FEMTAPTAKCFLRRFVHAAQGNNEVPSLQLECLANYVAELSLLEYNMLCYSPSLI 345
           FEMTAPTAKCFLRRFV AAQG NEVPSLQLECLANY+AELSLLEY+MLCY+PSLI
Sbjct: 354 FEMTAPTAKCFLRRFVRAAQGMNEVPSLQLECLANYIAELSLLEYSMLCYAPSLI 408


>ref|XP_002306649.1| predicted protein [Populus trichocarpa] gi|222856098|gb|EEE93645.1|
           predicted protein [Populus trichocarpa]
          Length = 493

 Score =  215 bits (548), Expect = 3e-54
 Identities = 101/115 (87%), Positives = 110/115 (95%)
 Frame = +1

Query: 1   SGNAMNRQRLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNYLK 180
           SGN MNRQRLQLLG+ACMM+AAKYEEICAPQVEEFCYITDNTYF++EVL+MES VLNYLK
Sbjct: 292 SGNVMNRQRLQLLGIACMMVAAKYEEICAPQVEEFCYITDNTYFRDEVLEMESTVLNYLK 351

Query: 181 FEMTAPTAKCFLRRFVHAAQGNNEVPSLQLECLANYVAELSLLEYNMLCYSPSLI 345
           FEMTAPTAKCFLRRFV AAQG NEVPS+QLECLANY+AELSLLEY MLCY+PSL+
Sbjct: 352 FEMTAPTAKCFLRRFVRAAQGINEVPSMQLECLANYIAELSLLEYTMLCYAPSLV 406


>ref|NP_001233762.1| cyclin A1 [Solanum lycopersicum] gi|5420274|emb|CAB46641.1| cyclin
           A1 [Solanum lycopersicum]
          Length = 490

 Score =  211 bits (536), Expect = 7e-53
 Identities = 105/115 (91%), Positives = 110/115 (95%)
 Frame = +1

Query: 1   SGNAMNRQRLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNYLK 180
           SGN M+RQRLQLLGVACMMIA+KYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNYLK
Sbjct: 289 SGNLMDRQRLQLLGVACMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNYLK 348

Query: 181 FEMTAPTAKCFLRRFVHAAQGNNEVPSLQLECLANYVAELSLLEYNMLCYSPSLI 345
           FEMTAPTAKCFLRRFV AAQG NEV SLQLE LA+Y+AELSLLEYNMLCY+PSLI
Sbjct: 349 FEMTAPTAKCFLRRFVRAAQGLNEVLSLQLEHLASYIAELSLLEYNMLCYAPSLI 403


>gb|AAN87004.1| cyclin A [Populus alba]
          Length = 191

 Score =  209 bits (533), Expect = 1e-52
 Identities = 100/115 (86%), Positives = 108/115 (93%)
 Frame = +1

Query: 1   SGNAMNRQRLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNYLK 180
           SGN MNRQRLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYF++EVL+MES VLNYLK
Sbjct: 19  SGNVMNRQRLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTYFRDEVLEMESTVLNYLK 78

Query: 181 FEMTAPTAKCFLRRFVHAAQGNNEVPSLQLECLANYVAELSLLEYNMLCYSPSLI 345
           FEMTAPTAKCFLRRFV AAQG  E PS+QLECLANY+AEL LLEY+MLCY+PSL+
Sbjct: 79  FEMTAPTAKCFLRRFVRAAQGIIEAPSMQLECLANYIAELPLLEYSMLCYAPSLV 133


Top