BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030395
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containi...    92   6e-17
gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]    86   4e-15
ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group] g...    85   5e-15

>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
           [Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
           protein product [Vitis vinifera]
          Length = 618

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/67 (67%), Positives = 56/67 (83%)
 Frame = +1

Query: 1   DESARMRGLMRERGVTKTPGCSWIEIENQLHEFHAGDGFVHGSRDIDGIIYLLNQDMKIE 180
           D+SARMR LMR+RGVTKTPGCSWIEIENQ+HEFHAGD     S+D+  +I LLN++MK+E
Sbjct: 550 DDSARMRVLMRQRGVTKTPGCSWIEIENQVHEFHAGDVLHFISQDMCQVINLLNEEMKVE 609

Query: 181 GYITRID 201
           GY  ++D
Sbjct: 610 GYGPKVD 616


>ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 608

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/66 (60%), Positives = 53/66 (80%)
 Frame = +1

Query: 1   DESARMRGLMRERGVTKTPGCSWIEIENQLHEFHAGDGFVHGSRDIDGIIYLLNQDMKIE 180
           ++SARMR LMR++G+TKTPGCSWIE+EN LHEFHAGDG    S D+  II LL +++K E
Sbjct: 541 EDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKRE 600

Query: 181 GYITRI 198
           GY+ ++
Sbjct: 601 GYVPKV 606


>ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g34400-like [Glycine max]
          Length = 614

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 40/66 (60%), Positives = 53/66 (80%)
 Frame = +1

Query: 1   DESARMRGLMRERGVTKTPGCSWIEIENQLHEFHAGDGFVHGSRDIDGIIYLLNQDMKIE 180
           ++SARMR LMR++G+TKTPGCSWIE+EN LHEFHAGDG    S D+  II LL +++K E
Sbjct: 547 EDSARMRLLMRQKGITKTPGCSWIEVENHLHEFHAGDGLCLDSIDLSNIIDLLYEELKRE 606

Query: 181 GYITRI 198
           GY+ ++
Sbjct: 607 GYVPKV 612


>gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 609

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 40/66 (60%), Positives = 50/66 (75%)
 Frame = +1

Query: 1   DESARMRGLMRERGVTKTPGCSWIEIENQLHEFHAGDGFVHGSRDIDGIIYLLNQDMKIE 180
           D++ARMR LMRE GVTKTPGCSWIE+ NQL EF +GDG    S D+  II LL +++K E
Sbjct: 542 DDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGDGLTLDSIDVRNIIDLLYEELKKE 601

Query: 181 GYITRI 198
           GY+ +I
Sbjct: 602 GYVPKI 607


>ref|NP_001174340.1| Os05g0313600 [Oryza sativa Japonica Group]
           gi|222631076|gb|EEE63208.1| hypothetical protein
           OsJ_18018 [Oryza sativa Japonica Group]
           gi|255676232|dbj|BAH93068.1| Os05g0313600 [Oryza sativa
           Japonica Group]
          Length = 620

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 37/68 (54%), Positives = 53/68 (77%)
 Frame = +1

Query: 1   DESARMRGLMRERGVTKTPGCSWIEIENQLHEFHAGDGFVHGSRDIDGIIYLLNQDMKIE 180
           D+SA+MRGLMRERGV KTPGCSW+EI  ++ EF+AGD   HG+ D+  ++ LL  +M++E
Sbjct: 552 DDSAKMRGLMRERGVNKTPGCSWVEISGKVLEFYAGDEPQHGADDMYQVLDLLVDEMRLE 611

Query: 181 GYITRIDL 204
           GY+  +D+
Sbjct: 612 GYVPNLDV 619