BLASTX nr result

ID: Cimicifuga21_contig00030382 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030382
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officin...   110   2e-22
ref|XP_002332290.1| predicted protein [Populus trichocarpa] gi|2...   108   6e-22
ref|XP_002307225.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002332556.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         80   2e-13

>gb|ABD63151.1| hypothetical protein 20.t00003 [Asparagus officinalis]
          Length = 1011

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/123 (43%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
 Frame = -3

Query: 375  DIKYLVIXXXXXXXXXXXXXXXXLTKSIENRIHLKMKLYRFSMKKCITMGEHLNNFTKLL 196
            ++KY VI                LTKS+ENR+HL  +L+RF M +  ++  ++NN+TKLL
Sbjct: 851  ELKYDVIGVTSVMKMWEILNNKYLTKSVENRLHLLRRLFRFQMSRGTSLAAYVNNYTKLL 910

Query: 195  TDLVNMDEKVSDEDKVVILLNSLP-EEYESFVLTIIHGNSELTYEYVSTALINYEFKRKK 19
            ++L N+DEK+SDE K +ILL SLP EEY++F+LT+++G   ++Y  ++ AL NY+ +RK 
Sbjct: 911  SNLANVDEKISDEYKTIILLGSLPDEEYDTFLLTLLNGRPSISYSEITNALTNYDLRRKD 970

Query: 18   KVT 10
            K T
Sbjct: 971  KET 973


>ref|XP_002332290.1| predicted protein [Populus trichocarpa] gi|222832452|gb|EEE70929.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  108 bits (269), Expect = 6e-22
 Identities = 47/100 (47%), Positives = 74/100 (74%)
 Frame = -3

Query: 300 KSIENRIHLKMKLYRFSMKKCITMGEHLNNFTKLLTDLVNMDEKVSDEDKVVILLNSLPE 121
           KSIENR++LK +++RF  KK  +M EHLN+F K++ DL N+D ++ DEDK ++LLNSLP+
Sbjct: 54  KSIENRLYLKKRIFRFQHKKGSSMNEHLNDFNKMIADLKNLDVEIDDEDKALLLLNSLPD 113

Query: 120 EYESFVLTIIHGNSELTYEYVSTALINYEFKRKKKVTEKE 1
            YE  V T+++G  ++ +  VS AL+N E+++K ++  KE
Sbjct: 114 TYEHLVTTLLYGKEKIKFIDVSNALVNNEYRKKDQIVHKE 153


>ref|XP_002307225.1| predicted protein [Populus trichocarpa] gi|222856674|gb|EEE94221.1|
           predicted protein [Populus trichocarpa]
          Length = 279

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/100 (47%), Positives = 73/100 (73%)
 Frame = -3

Query: 300 KSIENRIHLKMKLYRFSMKKCITMGEHLNNFTKLLTDLVNMDEKVSDEDKVVILLNSLPE 121
           KSIENR++LK +++RF  KK  +M EHLN+F K+  DL N+D ++ DEDK ++LLNSLP+
Sbjct: 113 KSIENRLYLKKRIFRFQHKKGTSMNEHLNDFNKMTADLKNLDVEIDDEDKALLLLNSLPD 172

Query: 120 EYESFVLTIIHGNSELTYEYVSTALINYEFKRKKKVTEKE 1
            YE  V T+++G  ++ +  VS AL+N E+++K ++  KE
Sbjct: 173 IYEHLVTTLLYGKEKIKFIDVSNALVNNEYRKKDQIVHKE 212


>ref|XP_002332556.1| predicted protein [Populus trichocarpa] gi|222833032|gb|EEE71509.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 41/90 (45%), Positives = 65/90 (72%)
 Frame = -3

Query: 300 KSIENRIHLKMKLYRFSMKKCITMGEHLNNFTKLLTDLVNMDEKVSDEDKVVILLNSLPE 121
           KSIENR++LK +++ F  KK  +M EHLN+F K++ DL N+D ++ DEDK ++LLNSL +
Sbjct: 54  KSIENRLYLKKRIFHFQHKKGTSMNEHLNDFNKMIADLKNLDVEIDDEDKALLLLNSLSD 113

Query: 120 EYESFVLTIIHGNSELTYEYVSTALINYEF 31
            YE  V T+++G  ++ +  +S AL+N E+
Sbjct: 114 TYEHLVTTLLYGKEKIKFIDMSNALVNNEY 143


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/93 (40%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
 Frame = -3

Query: 300 KSIENRIHLKMKLYRFSMKKCITMGEHLNNFTKLLTDLVNMDE-KVSDEDKVVILLNSLP 124
           KS+ +R+ LK +LY FSM++ +T+ +H++ F K++ DL  ++  K+ DEDK   LL+SLP
Sbjct: 97  KSLAHRLFLKKRLYTFSMREGVTIQDHIDTFNKIILDLEGVENVKICDEDKAFFLLSSLP 156

Query: 123 EEYESFVLTIIHGNSELTYEYVSTALINYEFKR 25
           + YE FV T+++G + LT E V  +L + E ++
Sbjct: 157 KSYEGFVDTMLYGRTTLTLEDVKASLSSKEIQK 189


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