BLASTX nr result

ID: Cimicifuga21_contig00030359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030359
         (556 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277583.1| PREDICTED: pollen-specific protein SF21 [Vit...   137   9e-31
emb|CAN68782.1| hypothetical protein VITISV_018992 [Vitis vinifera]   137   9e-31
ref|XP_002539945.1| pollen specific protein sf21, putative [Rici...   131   8e-29
ref|XP_002319631.1| predicted protein [Populus trichocarpa] gi|1...   131   8e-29
ref|NP_001241488.1| uncharacterized protein LOC100803300 [Glycin...   123   2e-26

>ref|XP_002277583.1| PREDICTED: pollen-specific protein SF21 [Vitis vinifera]
           gi|298204892|emb|CBI34199.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  137 bits (346), Expect = 9e-31
 Identities = 67/91 (73%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
 Frame = -1

Query: 556 SCKMDRKNTALVEVQSCGSLVTEEHPYAMLIPIEFFLMGFGYYRQPP---ALTHSSNPAS 386
           S KMDRK++ LVE+Q+CGSLVTEEHPYAMLIPIE FLMGFGYYRQ P   + ++ SNPAS
Sbjct: 262 SAKMDRKSSVLVEIQACGSLVTEEHPYAMLIPIELFLMGFGYYRQLPFASSSSNGSNPAS 321

Query: 385 PSYHACISPELLSPESLGIKLKPIKTRIKVK 293
           P  H+CI+PELLSPESLGIKLKPIKTR  ++
Sbjct: 322 PLSHSCIAPELLSPESLGIKLKPIKTRATIE 352


>emb|CAN68782.1| hypothetical protein VITISV_018992 [Vitis vinifera]
          Length = 380

 Score =  137 bits (346), Expect = 9e-31
 Identities = 67/91 (73%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
 Frame = -1

Query: 556 SCKMDRKNTALVEVQSCGSLVTEEHPYAMLIPIEFFLMGFGYYRQPP---ALTHSSNPAS 386
           S KMDRK++ LVE+Q+CGSLVTEEHPYAMLIPIE FLMGFGYYRQ P   + ++ SNPAS
Sbjct: 289 SAKMDRKSSVLVEIQACGSLVTEEHPYAMLIPIELFLMGFGYYRQLPFASSSSNGSNPAS 348

Query: 385 PSYHACISPELLSPESLGIKLKPIKTRIKVK 293
           P  H+CI+PELLSPESLGIKLKPIKTR  ++
Sbjct: 349 PLSHSCIAPELLSPESLGIKLKPIKTRATIE 379


>ref|XP_002539945.1| pollen specific protein sf21, putative [Ricinus communis]
           gi|223500849|gb|EEF22438.1| pollen specific protein
           sf21, putative [Ricinus communis]
          Length = 140

 Score =  131 bits (329), Expect = 8e-29
 Identities = 62/86 (72%), Positives = 76/86 (88%), Gaps = 3/86 (3%)
 Frame = -1

Query: 550 KMDRKNTALVEVQSCGSLVTEEHPYAMLIPIEFFLMGFGYYRQP---PALTHSSNPASPS 380
           KM +K+ ALVEVQ+CGSLVTEEHPYAM+IP+E +LMGFGY+RQP    + ++ SNPASPS
Sbjct: 54  KMGKKSCALVEVQACGSLVTEEHPYAMVIPMELYLMGFGYHRQPHFASSSSNGSNPASPS 113

Query: 379 YHACISPELLSPESLGIKLKPIKTRI 302
            H+CI+PELLSPESLG+KLKPIKTR+
Sbjct: 114 SHSCIAPELLSPESLGVKLKPIKTRV 139


>ref|XP_002319631.1| predicted protein [Populus trichocarpa] gi|118486441|gb|ABK95060.1|
           unknown [Populus trichocarpa]
           gi|222858007|gb|EEE95554.1| predicted protein [Populus
           trichocarpa]
          Length = 355

 Score =  131 bits (329), Expect = 8e-29
 Identities = 65/90 (72%), Positives = 74/90 (82%), Gaps = 3/90 (3%)
 Frame = -1

Query: 556 SCKMDRKNTALVEVQSCGSLVTEEHPYAMLIPIEFFLMGFGYYRQPPALTHS---SNPAS 386
           S KM +K  ALVEV++CGSLVTEEHPYAM+IPIEFFLMGFGY+RQP   + S   SNP S
Sbjct: 262 STKMGKKTCALVEVEACGSLVTEEHPYAMIIPIEFFLMGFGYHRQPYFASSSSIGSNPTS 321

Query: 385 PSYHACISPELLSPESLGIKLKPIKTRIKV 296
           PS   CI+PELLSPESLGIKLKPIKTR+ +
Sbjct: 322 PSSRCCIAPELLSPESLGIKLKPIKTRVDI 351


>ref|NP_001241488.1| uncharacterized protein LOC100803300 [Glycine max]
           gi|255637191|gb|ACU18926.1| unknown [Glycine max]
          Length = 353

 Score =  123 bits (309), Expect = 2e-26
 Identities = 62/91 (68%), Positives = 75/91 (82%), Gaps = 3/91 (3%)
 Frame = -1

Query: 556 SCKMDRKNTALVEVQSCGSLVTEEHPYAMLIPIEFFLMGFGYYRQPPALTHS---SNPAS 386
           S KM+ K  ALVEVQ+CGSLVTEEHP +M+ P+E FLMGFGY+RQ  A + S   SNPAS
Sbjct: 262 SSKMNHKICALVEVQACGSLVTEEHPNSMITPLERFLMGFGYHRQTHAASSSSNGSNPAS 321

Query: 385 PSYHACISPELLSPESLGIKLKPIKTRIKVK 293
           P+ H+CI+PELLSPESLGIKLKPI+TR+ V+
Sbjct: 322 PTSHSCIAPELLSPESLGIKLKPIRTRVDVQ 352


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