BLASTX nr result
ID: Cimicifuga21_contig00030350
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00030350
(887 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera] 79 4e-32
emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera] 78 1e-30
ref|NP_001064331.1| Os10g0317000 [Oryza sativa Japonica Group] g... 75 2e-30
ref|XP_002453806.1| hypothetical protein SORBIDRAFT_04g018075 [S... 76 5e-30
ref|XP_002443111.1| hypothetical protein SORBIDRAFT_08g008675 [S... 71 3e-29
>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
Length = 1360
Score = 79.0 bits (193), Expect(3) = 4e-32
Identities = 41/101 (40%), Positives = 63/101 (62%), Gaps = 2/101 (1%)
Frame = +2
Query: 5 AMTRAPVLVLSDFTKQLM*SATLLVQELGQVYCRR--PIDFYGHALGGIHLLLSTCEKEI 178
A+T P+L L DF++ + +G + ++ + ++ AL G L LST EKE+
Sbjct: 790 ALTSPPILCLPDFSQPFVIECDASGLGIGAILTQQNQXVAYFSEALKGSALALSTYEKEM 849
Query: 179 LALVLVVQKWRTYLLGRQFIVRTDHQSLKHL*SQKITTDAQ 301
LA++ ++KWR YLLG+ F RT+H+SLK+L Q+ITT AQ
Sbjct: 850 LAIIKAIKKWRPYLLGKPFTXRTBHKSLKYLLEQRITTPAQ 890
Score = 59.3 bits (142), Expect(3) = 4e-32
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +1
Query: 571 YLYKNSLLIADIIGEFHGST---HEGFLKTFHRIRSNFYWSRMSARIKEFTKNCDIVSDT 741
YL S LI I+ + H S+ H GF KT I+ +F W M +KEF + CD+
Sbjct: 979 YLSPTSSLIPKILXDCHSSSIGGHFGFHKTLSXIKHSFVWPSMXRMVKEFLQQCDVCQRF 1038
Query: 742 KWSKLHQQACFNYFLYLLKYGEDIAMDFIDGLPLSNG 852
K + + D++MDFI+GLP SNG
Sbjct: 1039 KXDCMKPAXLLQPLPIPHQMWTDVSMDFIEGLPSSNG 1075
Score = 47.0 bits (110), Expect(3) = 4e-32
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = +3
Query: 279 KRLQRMLKKRWLYK*MGFDYLVEYRRGKENTVADALSRREETETTVGESCAISQPVPNWI 458
+R+ + RWL K +G+DY +EY+RG EN AD+LSR E + ++S P +W
Sbjct: 883 QRITTPAQTRWLPKLLGYDYKIEYKRGPENQGADSLSRVVEFQI-----LSLSMPHADWW 937
Query: 459 EAIKEE 476
+++E
Sbjct: 938 SILQKE 943
>emb|CAN70510.1| hypothetical protein VITISV_023158 [Vitis vinifera]
Length = 790
Score = 78.2 bits (191), Expect(3) = 1e-30
Identities = 44/101 (43%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Frame = +2
Query: 5 AMTRAPVLVLSDFTKQLM*SATLLVQELGQVYCR--RPIDFYGHALGGIHLLLSTCEKEI 178
A+T P+L L DFT++ + LG + + RP+ ++ AL G L LS EKE+
Sbjct: 200 ALTSPPILRLPDFTQRFVIECDASGIGLGAILTQENRPVAYFSQALKGSALSLSIYEKEM 259
Query: 179 LALVLVVQKWRTYLLGRQFIVRTDHQSLKHL*SQKITTDAQ 301
LA+V ++ W YLLG+ F VRTD +SLK+L Q+ITT AQ
Sbjct: 260 LAIVKAIKLWHPYLLGKPFTVRTDQKSLKYLLEQRITTPAQ 300
Score = 54.3 bits (129), Expect(3) = 1e-30
Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Frame = +1
Query: 571 YLYKNSLLIADIIGEFHGST---HEGFLKTFHRIRSNFYWSRMSARIKEFTKNCDIVSDT 741
YL NS LI+ I+ ++H S H GF KT RI+ +F+WS M R F +C
Sbjct: 389 YLSPNSSLISKIMADYHSSPIGGHFGFHKTLSRIKQSFFWSNM--RRMRFKIDC-----M 441
Query: 742 KWSKLHQQACFNYFLYLLKYGEDIAMDFIDGLPLSNGCMGCLV 870
K + L Q +++ D++MDFI+GLP SNG +V
Sbjct: 442 KLAGLLQPLPVPTQMWI-----DVSMDFIEGLPSSNGYTSIMV 479
Score = 47.8 bits (112), Expect(3) = 1e-30
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +3
Query: 279 KRLQRMLKKRWLYK*MGFDYLVEYRRGKENTVADALSRREETETTVGESCAISQPVPNWI 458
+R+ + RWL K +G+DY +EY+RG N AD+LSR E + +ISQP NW
Sbjct: 293 QRITTPAQTRWLPKLLGYDYEIEYKRGLGNQGADSLSRVVEF-----QFLSISQPRENWW 347
Query: 459 EAIKEE 476
+++E
Sbjct: 348 PVLQKE 353
>ref|NP_001064331.1| Os10g0317000 [Oryza sativa Japonica Group]
gi|15217201|gb|AAK92545.1|AC051624_3 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431040|gb|AAP52878.1| retrotransposon protein,
putative, unclassified, expressed [Oryza sativa Japonica
Group] gi|113638940|dbj|BAF26245.1| Os10g0317000 [Oryza
sativa Japonica Group]
Length = 1476
Score = 75.5 bits (184), Expect(3) = 2e-30
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = +2
Query: 5 AMTRAPVLVLSDFTKQLM*SATLLVQELGQVYC--RRPIDFYGHALGGIHLLLSTCEKEI 178
A+T APVL L DF K + G V + P+ F+ + H L+ E+E+
Sbjct: 811 AVTTAPVLALPDFVKPFVVECDASTHGFGAVLLQDKHPLAFFSRPVAPRHRALAAYEREL 870
Query: 179 LALVLVVQKWRTYLLGRQFIVRTDHQSLKHL*SQKITTDAQ 301
+ LVL ++ WR YL GR F+VRTDH SLK+L Q++ T Q
Sbjct: 871 IGLVLAIRHWRPYLWGRAFVVRTDHYSLKYLLDQRLATIPQ 911
Score = 53.9 bits (128), Expect(3) = 2e-30
Identities = 32/116 (27%), Positives = 48/116 (41%)
Frame = +1
Query: 505 GEAGEPWRLQXXXXXXXXXXXXYLYKNSLLIADIIGEFHGSTHEGFLKTFHRIRSNFYWS 684
G PW L+ Y+ +S L+ +I+ H HEG +T HR+R +F+
Sbjct: 983 GTRSAPWALRDGMVMFDSRL--YIPPSSPLLHEILAAIHTDGHEGVQRTLHRLRRDFHSP 1040
Query: 685 RMSARIKEFTKNCDIVSDTKWSKLHQQACFNYFLYLLKYGEDIAMDFIDGLPLSNG 852
M ++EF + CD K LH DI +DF++ LP G
Sbjct: 1041 AMRRVVQEFVRACDTCQRNKSEHLHPGGLLLPLPVPTTVWADIGLDFVEALPRVGG 1096
Score = 50.4 bits (119), Expect(3) = 2e-30
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +3
Query: 279 KRLQRMLKKRWLYK*MGFDYLVEYRRGKENTVADALSRREETETTVGESCAISQPVPNWI 458
+RL + + W+ K +GFD+ VEY+ G N VADALSRR+ E G A+S P ++I
Sbjct: 904 QRLATIPQHHWVGKLLGFDFTVEYKSGASNVVADALSRRDTDE---GAVLALSAPRFDYI 960
Query: 459 EAIK 470
E ++
Sbjct: 961 ERLR 964
>ref|XP_002453806.1| hypothetical protein SORBIDRAFT_04g018075 [Sorghum bicolor]
gi|241933637|gb|EES06782.1| hypothetical protein
SORBIDRAFT_04g018075 [Sorghum bicolor]
Length = 1414
Score = 75.9 bits (185), Expect(3) = 5e-30
Identities = 42/101 (41%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Frame = +2
Query: 5 AMTRAPVLVLSDFTKQLM*SATLLVQELGQVYCRR--PIDFYGHALGGIHLLLSTCEKEI 178
A+T APVL L DF+K + G V + PI F+ + H L+ E+E+
Sbjct: 749 AVTSAPVLTLPDFSKPFIVECDASTYGFGAVLIQEGHPIAFFSRPVAPRHRSLAAYEREL 808
Query: 179 LALVLVVQKWRTYLLGRQFIVRTDHQSLKHL*SQKITTDAQ 301
+ LVL V+ WR YL GR+FIV+TDH SLK+L Q++ T Q
Sbjct: 809 IGLVLAVRHWRPYLWGRRFIVKTDHYSLKYLLDQRLATIPQ 849
Score = 56.2 bits (134), Expect(3) = 5e-30
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +3
Query: 279 KRLQRMLKKRWLYK*MGFDYLVEYRRGKENTVADALSRREETETTVGESCAISQPVPNWI 458
+RL + + W+ K +GFD+ VEY+ G NTVADALSRR+ E +VG AIS P ++I
Sbjct: 842 QRLATIPQHHWVGKLLGFDFTVEYKSGASNTVADALSRRDTEEDSVGGLQAISAPRFDFI 901
Query: 459 EAIK 470
++
Sbjct: 902 ARLR 905
Score = 46.2 bits (108), Expect(3) = 5e-30
Identities = 25/94 (26%), Positives = 43/94 (45%)
Frame = +1
Query: 571 YLYKNSLLIADIIGEFHGSTHEGFLKTFHRIRSNFYWSRMSARIKEFTKNCDIVSDTKWS 750
Y+ +S L+ +I+ H HEG +T HR+R +F++ +M +++F + C K
Sbjct: 944 YIPPSSPLVQEIVAAVHYDGHEGVQRTLHRLRRDFHFPQMRRIVQDFVRACVTCQRYKSE 1003
Query: 751 KLHQQACFNYFLYLLKYGEDIAMDFIDGLPLSNG 852
L DI +DF++ LP G
Sbjct: 1004 HLLPAGLLLPLPVPTVVWADIGLDFVEALPRVQG 1037
>ref|XP_002443111.1| hypothetical protein SORBIDRAFT_08g008675 [Sorghum bicolor]
gi|241943804|gb|EES16949.1| hypothetical protein
SORBIDRAFT_08g008675 [Sorghum bicolor]
Length = 1456
Score = 70.9 bits (172), Expect(3) = 3e-29
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Frame = +2
Query: 5 AMTRAPVLVLSDFTKQLM*SATLLVQELGQVYCRR--PIDFYGHALGGIHLLLSTCEKEI 178
A+T APVL + DF K G V + PI F+ + H L+ E+E+
Sbjct: 787 AVTSAPVLTMPDFAKPFTVECDASTHGFGAVLIQEGHPIAFFSRPVAPRHRALAAYEREL 846
Query: 179 LALVLVVQKWRTYLLGRQFIVRTDHQSLKHL*SQKITTDAQ 301
+ LV V+ WR YL GR+F+V+TDH +LK+L Q+++T Q
Sbjct: 847 IGLVHAVRHWRPYLWGRRFVVKTDHYNLKYLLDQRLSTIPQ 887
Score = 58.2 bits (139), Expect(3) = 3e-29
Identities = 29/67 (43%), Positives = 43/67 (64%)
Frame = +3
Query: 279 KRLQRMLKKRWLYK*MGFDYLVEYRRGKENTVADALSRREETETTVGESCAISQPVPNWI 458
+RL + + W+ K +GFD+ VEY+ G NTVADALSRR+ E T G A+S P ++I
Sbjct: 880 QRLSTIPQHHWVGKLLGFDFSVEYKPGVTNTVADALSRRDTEEETAGAVLALSAPRFDFI 939
Query: 459 EAIKEEN 479
+++ N
Sbjct: 940 TRLRQAN 946
Score = 46.6 bits (109), Expect(3) = 3e-29
Identities = 29/116 (25%), Positives = 47/116 (40%)
Frame = +1
Query: 505 GEAGEPWRLQXXXXXXXXXXXXYLYKNSLLIADIIGEFHGSTHEGFLKTFHRIRSNFYWS 684
G G PW + Y+ S L+ +++ H HEG +T HR+R +F++
Sbjct: 962 GARGMPWSV--VDDMVQYSGRLYIPPGSPLLQELVLAVHEDGHEGVQRTLHRLRRDFHFP 1019
Query: 685 RMSARIKEFTKNCDIVSDTKWSKLHQQACFNYFLYLLKYGEDIAMDFIDGLPLSNG 852
M ++E + C + K L DIA+DF++ LP G
Sbjct: 1020 NMKQVVQELIRVCVVCQRYKSEHLQPTGLLLPLSVPQGIWTDIALDFVEALPRVRG 1075