BLASTX nr result

ID: Cimicifuga21_contig00030340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030340
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317554.1| nbs-lrr resistance protein [Populus trichoca...    65   4e-09
gb|ABF81456.1| NBS type disease resistance protein [Populus tric...    65   4e-09
ref|XP_002322892.1| nbs-lrr resistance protein [Populus trichoca...    59   5e-07

>ref|XP_002317554.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222860619|gb|EEE98166.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 730

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
 Frame = -2

Query: 334 DDILLDCQIRADYEK--VSPLQRYGPRGWTFRRNAENMLKQMNKRLDDMENQLKTYLNSM 161
           ++IL DC +RA+Y K        + PR   F+      LK +N+R+  M+  LK Y  ++
Sbjct: 73  EEILTDCLLRAEYRKEGFQCCSNFTPRELIFQYRTGKKLKDINERIKKMQKILKAYFKTI 132

Query: 160 NQSIQISNEGSNRSAKWSSHILSRSMIIGLTEDLQKIIG-LITANERSRRIGIV 2
            Q   I ++  +   +W+S +   S I+GL ED +KIIG ++  N    ++GIV
Sbjct: 133 GQQ-SIHDDRGSIGKRWTSPVYDESAIVGLIEDTEKIIGWILPENRMLHQVGIV 185


>gb|ABF81456.1| NBS type disease resistance protein [Populus trichocarpa]
          Length = 643

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 37/114 (32%), Positives = 61/114 (53%), Gaps = 3/114 (2%)
 Frame = -2

Query: 334 DDILLDCQIRADYEK--VSPLQRYGPRGWTFRRNAENMLKQMNKRLDDMENQLKTYLNSM 161
           ++IL DC +RA+Y K        + PR   F+      LK +N+R+  M+  LK Y  ++
Sbjct: 73  EEILTDCLLRAEYRKEGFQCCSNFTPRELIFQYRTGKKLKDINERIKKMQKILKAYFKTI 132

Query: 160 NQSIQISNEGSNRSAKWSSHILSRSMIIGLTEDLQKIIG-LITANERSRRIGIV 2
            Q   I ++  +   +W+S +   S I+GL ED +KIIG ++  N    ++GIV
Sbjct: 133 GQQ-SIHDDRGSIGKRWTSPVYDESAIVGLIEDTEKIIGWILPENRMLHQVGIV 185


>ref|XP_002322892.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|105923264|gb|ABF81467.1| NBS-LRR type disease
           resistance protein [Populus trichocarpa]
           gi|222867522|gb|EEF04653.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 855

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
 Frame = -2

Query: 334 DDILLDCQIRADYEKVSPLQRYGPRGWTFRRNAENMLKQMNKRLDDMENQLKTYLNSMNQ 155
           DDIL DC +R DY+K     +Y P  + FR      L  +N R+  M + L+ YL    Q
Sbjct: 75  DDILTDCVLRYDYQKDGSCSKYTPDEFFFRCRMGRQLMDLNSRMGKMGSDLRAYLTP--Q 132

Query: 154 SIQISNEGSNRSAKWSSHILSRSMIIGLTEDLQKI-IGLITANERSRRIGIV 2
            +    +   R+  ++S     S +IGL ED++K+   + +A+   +RIGIV
Sbjct: 133 HLLSLGDNPYRAKVFTSQDFEPSEVIGLEEDIEKLKRWIFSASGVLQRIGIV 184