BLASTX nr result

ID: Cimicifuga21_contig00030322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030322
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35192.3| unnamed protein product [Vitis vinifera]               78   2e-12
ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat...    78   2e-12
emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]    78   2e-12
ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat...    75   2e-11
ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat...    73   6e-11

>emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
 Frame = +1

Query: 1   GKLDEAKELFYSLDAKELELDTRTYNILFKAFCKQGMLKEAEDLFCEMKEKGLAPNDFTY 180
           G+L++A++LF +L +K L+ +  TYNI+    CKQG+L EA  LF EM + G +PND TY
Sbjct: 409 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 468

Query: 181 NILTVGFEVQKNKAMK-------LLKKGVSPNDETMSML 276
           N++T GF ++ N+A++       +L +G S +  T ++L
Sbjct: 469 NLITRGF-LRNNEALRTIELLEEMLARGFSVDVSTTTLL 506



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
 Frame = +1

Query: 7   LDEAKELFYSLDAKELELDTRTYNILFKAFCKQGMLKEAEDLFCEMKEKGLAPNDFTYNI 186
           LD+A  L  +++    + D + Y  +    C+ G L++A DLF  +  KGL PN +TYNI
Sbjct: 376 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 435

Query: 187 LTVGFEVQ--KNKAMKLL----KKGVSPNDETMSMLKR 282
           +  G   Q    +A KL     K G SPND T +++ R
Sbjct: 436 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 473


>ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
 Frame = +1

Query: 1   GKLDEAKELFYSLDAKELELDTRTYNILFKAFCKQGMLKEAEDLFCEMKEKGLAPNDFTY 180
           G+L++A++LF +L +K L+ +  TYNI+    CKQG+L EA  LF EM + G +PND TY
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528

Query: 181 NILTVGFEVQKNKAMK-------LLKKGVSPNDETMSML 276
           N++T GF ++ N+A++       +L +G S +  T ++L
Sbjct: 529 NLITRGF-LRNNEALRTIELLEEMLARGFSVDVSTTTLL 566



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
 Frame = +1

Query: 7   LDEAKELFYSLDAKELELDTRTYNILFKAFCKQGMLKEAEDLFCEMKEKGLAPNDFTYNI 186
           LD+A  L  +++    + D + Y  +    C+ G L++A DLF  +  KGL PN +TYNI
Sbjct: 436 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 495

Query: 187 LTVGFEVQ--KNKAMKLL----KKGVSPNDETMSMLKR 282
           +  G   Q    +A KL     K G SPND T +++ R
Sbjct: 496 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 533


>emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
 Frame = +1

Query: 1   GKLDEAKELFYSLDAKELELDTRTYNILFKAFCKQGMLKEAEDLFCEMKEKGLAPNDFTY 180
           G+L++A++LF +L +K L+ +  TYNI+    CKQG+L EA  LF EM + G +PND TY
Sbjct: 469 GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTY 528

Query: 181 NILTVGFEVQKNKAMK-------LLKKGVSPNDETMSML 276
           N++T GF ++ N+A++       +L +G S +  T ++L
Sbjct: 529 NLITRGF-LRNNEALRTIELLEEMLARGFSVDVSTTTLL 566



 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
 Frame = +1

Query: 7   LDEAKELFYSLDAKELELDTRTYNILFKAFCKQGMLKEAEDLFCEMKEKGLAPNDFTYNI 186
           LD+A  L  +++    + D + Y  +    C+ G L++A DLF  +  KGL PN +TYNI
Sbjct: 436 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 495

Query: 187 LTVGFEVQ--KNKAMKLL----KKGVSPNDETMSMLKR 282
           +  G   Q    +A KL     K G SPND T +++ R
Sbjct: 496 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 533


>ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 38/98 (38%), Positives = 63/98 (64%), Gaps = 6/98 (6%)
 Frame = +1

Query: 1   GKLDEAKELFYSLDAKELELDTRTYNILFKAFCKQGMLKEAEDLFCEMKEKGLAPNDFTY 180
           GK ++A+ELF  L +K +++D   Y  + K  CK+G+L +AEDL  +M+E G  PN+FTY
Sbjct: 407 GKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTY 466

Query: 181 NILTVG----FEVQKN-KAMKLLK-KGVSPNDETMSML 276
           N+L  G    +++ ++ K + L+K KG+S +  T  +L
Sbjct: 467 NVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELL 504


>ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 7/99 (7%)
 Frame = +1

Query: 1   GKLDEAKELFYSLDAKELELDTRTYNILFKAFCKQGMLKEAEDLFCEMKEKGLAPNDFTY 180
           G+L+ A++LF  L +K L  D RTY I+    C+QG+L EA  LF EM E G +PN  TY
Sbjct: 453 GELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTY 512

Query: 181 NILTVGFEVQKNKAMK-------LLKKGVSPNDETMSML 276
           N++T GF ++ N+ ++       +L +G S +  T ++L
Sbjct: 513 NLITRGF-LRNNETLRAIQLFQEMLSRGFSIDVSTTTLL 550


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