BLASTX nr result

ID: Cimicifuga21_contig00030317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030317
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 ho...   101   7e-20
ref|XP_002308870.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002517276.1| calmodulin-binding protein, putative [Ricinu...    91   1e-16
ref|XP_002277745.2| PREDICTED: cell division cycle protein 48 ho...    86   3e-15
emb|CBI32813.3| unnamed protein product [Vitis vinifera]               86   3e-15

>ref|XP_003520480.1| PREDICTED: cell division cycle protein 48 homolog AF_1297-like
            [Glycine max]
          Length = 1036

 Score =  101 bits (251), Expect = 7e-20
 Identities = 54/111 (48%), Positives = 70/111 (63%)
 Frame = +1

Query: 7    CSSNVNIKELAHLTDGCTGADISLICREAGNAAIEESRDALEVSMAHFRIGVGRVQPSLG 186
            C S+V++KELA LTDGCTGADISLICREA  AAIEES DA  ++M H ++ + ++QPS  
Sbjct: 931  CGSDVSLKELARLTDGCTGADISLICREAAVAAIEESLDASVITMEHLKMAIKQIQPSEV 990

Query: 187  HPSVVGYYQDFYTKFQRLVTSSTAVDDTGSTPSSIASSRFGIRTLLKSFSL 339
            H      YQ   TKFQR V      D+    P    S++F I   +KS++L
Sbjct: 991  HS-----YQKLSTKFQRAVRCCDIKDEFNDMPCDSRSTQFSIWKFIKSYTL 1036


>ref|XP_002308870.1| predicted protein [Populus trichocarpa] gi|222854846|gb|EEE92393.1|
            predicted protein [Populus trichocarpa]
          Length = 1042

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 57/103 (55%), Positives = 69/103 (66%)
 Frame = +1

Query: 7    CSSNVNIKELAHLTDGCTGADISLICREAGNAAIEESRDALEVSMAHFRIGVGRVQPSLG 186
            CSS+VNIKELA LTDGCTGADI+LICREA  AAIEE+ DA EV M H +  + +VQ    
Sbjct: 946  CSSDVNIKELACLTDGCTGADIALICREAAVAAIEENIDASEVPMQHLKTAIQQVQ---- 1001

Query: 187  HPSVVGYYQDFYTKFQRLVTSSTAVDDTGSTPSSIASSRFGIR 315
             P+ +  YQD   KFQRLV SS   D+ G+   S  ++ F IR
Sbjct: 1002 -PTEINSYQDLSAKFQRLVHSSDK-DELGNQECSSRANSFSIR 1042


>ref|XP_002517276.1| calmodulin-binding protein, putative [Ricinus communis]
            gi|223543539|gb|EEF45069.1| calmodulin-binding protein,
            putative [Ricinus communis]
          Length = 1094

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 53/100 (53%), Positives = 65/100 (65%)
 Frame = +1

Query: 7    CSSNVNIKELAHLTDGCTGADISLICREAGNAAIEESRDALEVSMAHFRIGVGRVQPSLG 186
            CSS+V+IKEL+HLT+GCTGADIS ICREA  AAIEE  DA EV+M H R  + + +P L 
Sbjct: 928  CSSDVSIKELSHLTEGCTGADISFICREAAMAAIEECIDASEVTMKHTRTAIRQAKP-LN 986

Query: 187  HPSVVGYYQDFYTKFQRLVTSSTAVDDTGSTPSSIASSRF 306
              S    Y +   KFQRLV S+   D      SS +S+RF
Sbjct: 987  TES----YNELSAKFQRLVHSNHRQDCLEEPKSSTSSNRF 1022


>ref|XP_002277745.2| PREDICTED: cell division cycle protein 48 homolog AF_1297-like [Vitis
            vinifera]
          Length = 1030

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/88 (54%), Positives = 62/88 (70%)
 Frame = +1

Query: 10   SSNVNIKELAHLTDGCTGADISLICREAGNAAIEESRDALEVSMAHFRIGVGRVQPSLGH 189
            SS+V+I ELA LT+G TGADISLICREA  AAIE++ DA E++M H +  + +VQ     
Sbjct: 930  SSDVSIGELAFLTEGYTGADISLICREAAIAAIEDNLDASEITMEHLKTAIRQVQ----- 984

Query: 190  PSVVGYYQDFYTKFQRLVTSSTAVDDTG 273
            PS +  YQ+  TKFQRLV SS   D++G
Sbjct: 985  PSELQSYQELSTKFQRLVHSSDKRDESG 1012


>emb|CBI32813.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/88 (54%), Positives = 62/88 (70%)
 Frame = +1

Query: 10   SSNVNIKELAHLTDGCTGADISLICREAGNAAIEESRDALEVSMAHFRIGVGRVQPSLGH 189
            SS+V+I ELA LT+G TGADISLICREA  AAIE++ DA E++M H +  + +VQ     
Sbjct: 856  SSDVSIGELAFLTEGYTGADISLICREAAIAAIEDNLDASEITMEHLKTAIRQVQ----- 910

Query: 190  PSVVGYYQDFYTKFQRLVTSSTAVDDTG 273
            PS +  YQ+  TKFQRLV SS   D++G
Sbjct: 911  PSELQSYQELSTKFQRLVHSSDKRDESG 938


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