BLASTX nr result

ID: Cimicifuga21_contig00030294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030294
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]    60   2e-07
emb|CAN82674.1| hypothetical protein VITISV_034254 [Vitis vinifera]    59   5e-07
emb|CAD40208.2| OSJNBa0019J05.6 [Oryza sativa Japonica Group]          57   1e-06
emb|CAN68039.1| hypothetical protein VITISV_018924 [Vitis vinifera]    57   2e-06
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]      57   2e-06

>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
 Frame = +1

Query: 19  AKFIPLATKEKLATEFSQLTQGGRLVTQYATKFHELSRYGPHLVGTEELKMEKFIGGLNP 198
           AKFIP + +++L  +F +L QG   V +Y T+FHELSR+   ++ TEE ++  F+ GL  
Sbjct: 221 AKFIPRSVRDRLRDQFCRLEQGSMSVAEYETRFHELSRHAEMILPTEEERVRCFVRGLRL 280

Query: 199 DLRLKV--LPAMGVPLMDFI 252
            LRL+   L + G   +D +
Sbjct: 281 QLRLETQSLVSAGRSFLDVV 300


>emb|CAN82674.1| hypothetical protein VITISV_034254 [Vitis vinifera]
          Length = 241

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/76 (38%), Positives = 45/76 (59%)
 Frame = +1

Query: 1   FKGRLEAKFIPLATKEKLATEFSQLTQGGRLVTQYATKFHELSRYGPHLVGTEELKMEKF 180
           F+  L + + P A + +   EF  L Q    VT+YA KF +LSRY P++V  E+++ E+F
Sbjct: 121 FEELLLSNYFPEAVRRQKRAEFIHLVQRNMTVTEYAAKFTQLSRYAPNVVADEQMRAEQF 180

Query: 181 IGGLNPDLRLKVLPAM 228
             GL  ++R +V P M
Sbjct: 181 QEGLRLNIRAQVAPFM 196


>emb|CAD40208.2| OSJNBa0019J05.6 [Oryza sativa Japonica Group]
          Length = 1616

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/68 (42%), Positives = 37/68 (54%)
 Frame = +1

Query: 1   FKGRLEAKFIPLATKEKLATEFSQLTQGGRLVTQYATKFHELSRYGPHLVGTEELKMEKF 180
           F        IPL        EF  LTQG R VT+Y  +F+ L+RY P  V  +E + EKF
Sbjct: 278 FTAAFRKTHIPLGVVSLKKKEFRSLTQGSRSVTEYLHEFNRLARYAPEDVRNDEERQEKF 337

Query: 181 IGGLNPDL 204
           +GGLN +L
Sbjct: 338 LGGLNDEL 345


>emb|CAN68039.1| hypothetical protein VITISV_018924 [Vitis vinifera]
          Length = 548

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/72 (40%), Positives = 40/72 (55%)
 Frame = +1

Query: 1   FKGRLEAKFIPLATKEKLATEFSQLTQGGRLVTQYATKFHELSRYGPHLVGTEELKMEKF 180
           F+     K+ P + + +   EF +L QG  +V  Y  KF ELSR+ P L+ TEE K  KF
Sbjct: 204 FREAFYKKYFPDSVRRQKVGEFIRLEQGDMIVAHYEAKFTELSRFSPQLIATEEEKALKF 263

Query: 181 IGGLNPDLRLKV 216
             GL P L+ K+
Sbjct: 264 QDGLKPYLKNKI 275


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/64 (40%), Positives = 44/64 (68%)
 Frame = +1

Query: 19  AKFIPLATKEKLATEFSQLTQGGRLVTQYATKFHELSRYGPHLVGTEELKMEKFIGGLNP 198
           A+F+P + +++L  +FS+L QG   V++Y T+FHELSR+   ++ TEE ++  F+ GL  
Sbjct: 380 ARFMPRSVRDRLRDQFSRLEQGPMTVSEYETRFHELSRHATMILPTEEERVRCFVRGLRY 439

Query: 199 DLRL 210
            LR+
Sbjct: 440 RLRV 443


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