BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030288
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus ...   123   1e-26
ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24
ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   113   1e-23
ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago trunc...   113   1e-23

>ref|XP_002510330.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551031|gb|EEF52517.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 426

 Score =  123 bits (309), Expect = 1e-26
 Identities = 71/163 (43%), Positives = 100/163 (61%), Gaps = 2/163 (1%)
 Frame = +2

Query: 2   RLSSLPIELINIILTRMPIRDAVRTSALSKFWRDRWMYIPDLVFDAR--SIPSFIEPLRS 175
           R+SSLP  +++ IL+++ IRDAVRTSALS+ WR +W  IP LVFD +  SIPS  + L  
Sbjct: 17  RISSLPGHVLDQILSQLSIRDAVRTSALSRKWRYKWAKIPHLVFDNKCVSIPSQDQTLIK 76

Query: 176 TKPVDLVNHVLFLHNEKITRFEIRNYLCGHCADVDRWIILLARKRVKELMLEFPIGNRYK 355
            K V++++HVL LHN  I +F++ +      +D+DRWI+ L+R  +KE +LE   G RYK
Sbjct: 77  DKLVNIIDHVLLLHNGPIQKFKLSHRDLLGVSDIDRWILHLSRSSIKEFILEIWKGQRYK 136

Query: 356 LSSSLFCCQNXXXXXXXXXXXXXXXXAKGFCRLVDLDLQEVTL 484
           + SSLF  ++                 KGF  L  LDLQ +TL
Sbjct: 137 VPSSLFSFEHLIHLELFNCLLQPPLTFKGFRSLKSLDLQHITL 179


>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  117 bits (294), Expect = 7e-25
 Identities = 70/163 (42%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
 Frame = +2

Query: 2   RLSSLPIELINIILTRMPIRDAVRTSALSKFWRDRWMYIPDLVFDAR--SIPSFIEPLRS 175
           R+SSLP  +++ IL+ +PIRDAVRTSALS+ WR +W  IP LVFD +  SI S  + +  
Sbjct: 7   RISSLPGHVLDQILSVLPIRDAVRTSALSRKWRYQWSQIPHLVFDTQCASITSQDQTIAK 66

Query: 176 TKPVDLVNHVLFLHNEKITRFEIRNYLCGHCADVDRWIILLARKRVKELMLEFPIGNRYK 355
              V+++++VL LHN  I +F++ +      +D+DRWI+ L+R   KE +LE   G RYK
Sbjct: 67  NNLVNIIDNVLLLHNGPIYKFKLSHRDLLGVSDIDRWILHLSRGSTKEFVLEIWKGQRYK 126

Query: 356 LSSSLFCCQNXXXXXXXXXXXXXXXXAKGFCRLVDLDLQEVTL 484
           L S LF  +N                 KGF  L  LDLQ VTL
Sbjct: 127 LPSCLFSFENLTHLELFNCLLKPPPAFKGFRNLKSLDLQHVTL 169


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score =  117 bits (292), Expect = 1e-24
 Identities = 68/163 (41%), Positives = 96/163 (58%), Gaps = 2/163 (1%)
 Frame = +2

Query: 2   RLSSLPIELINIILTRMPIRDAVRTSALSKFWRDRWMYIPDLVFDAR--SIPSFIEPLRS 175
           R+SSLP  ++  IL+ +PIRDAVRTSAL + WR +W  IP +VFD++  SI S  +    
Sbjct: 96  RISSLPGHVLGQILSLLPIRDAVRTSALKRKWRYKWSQIPHIVFDSQGISISSQDQTTIK 155

Query: 176 TKPVDLVNHVLFLHNEKITRFEIRNYLCGHCADVDRWIILLARKRVKELMLEFPIGNRYK 355
            K V++++H+L LHN  I +F++ +      +D+DRWI+ L+R   KE +LE   G +YK
Sbjct: 156 NKLVNIIDHILLLHNGPIYKFKLSHCDLLAVSDIDRWILHLSRGSTKEFVLEIWKGQQYK 215

Query: 356 LSSSLFCCQNXXXXXXXXXXXXXXXXAKGFCRLVDLDLQEVTL 484
           L S LF  +N                 KGF  L +LDLQ VTL
Sbjct: 216 LPSCLFSFKNLVYLELFNCLLKPPLAFKGFRNLKNLDLQHVTL 258


>ref|XP_003589308.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478356|gb|AES59559.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 428

 Score =  113 bits (283), Expect = 1e-23
 Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
 Frame = +2

Query: 2   RLSSLPIELINIILTRMPIRDAVRTSALSKFWRDRWMYIPDLVFDARSIPSFIEPLR--S 175
           R+SSLP  +I+ IL+ +PI++AVRTS LS  WR +W  +P+LVFD++ I    E L    
Sbjct: 18  RISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVIK 77

Query: 176 TKPVDLVNHVLFLHNEKITRFEIRNYLCGHCADVDRWIILLARKRVKELMLEFPIGNRYK 355
           +K   +++HVL LH+  I +F++ +       D+DRW + L R+ VKE +LE   G RYK
Sbjct: 78  SKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRYK 137

Query: 356 LSSSLFCCQNXXXXXXXXXXXXXXXXAKGFCRLVDLDLQEVTL 484
           + S LF CQ                  +GF  L  LDLQ VTL
Sbjct: 138 IPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTL 180


>ref|XP_003589307.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355478355|gb|AES59558.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 660

 Score =  113 bits (283), Expect = 1e-23
 Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 2/163 (1%)
 Frame = +2

Query: 2   RLSSLPIELINIILTRMPIRDAVRTSALSKFWRDRWMYIPDLVFDARSIPSFIEPLR--S 175
           R+SSLP  +I+ IL+ +PI++AVRTS LS  WR +W  +P+LVFD++ I    E L    
Sbjct: 250 RISSLPGHIIDQILSILPIKEAVRTSILSTKWRYKWATLPNLVFDSQCISDTSEDLLVIK 309

Query: 176 TKPVDLVNHVLFLHNEKITRFEIRNYLCGHCADVDRWIILLARKRVKELMLEFPIGNRYK 355
           +K   +++HVL LH+  I +F++ +       D+DRW + L R+ VKE +LE   G RYK
Sbjct: 310 SKLSRIIDHVLLLHSGPIKKFKLSHRELIGVTDIDRWTLHLTRRPVKEFVLEIWKGQRYK 369

Query: 356 LSSSLFCCQNXXXXXXXXXXXXXXXXAKGFCRLVDLDLQEVTL 484
           + S LF CQ                  +GF  L  LDLQ VTL
Sbjct: 370 IPSCLFSCQGLHHLELFNCWLIPPSTFQGFRNLKSLDLQHVTL 412