BLASTX nr result

ID: Cimicifuga21_contig00030271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030271
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159512.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    73   3e-11
ref|XP_004147940.1| PREDICTED: uncharacterized protein LOC101222...    73   3e-11
ref|XP_003538648.1| PREDICTED: uncharacterized protein LOC100805...    69   4e-10
ref|XP_002521049.1| DNA binding protein, putative [Ricinus commu...    65   6e-09
gb|AFW77494.1| hypothetical protein ZEAMMB73_824761 [Zea mays]         64   1e-08

>ref|XP_004159512.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101222344
           [Cucumis sativus]
          Length = 673

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
 Frame = +3

Query: 9   VFDQGKSIVDYMYNHTIVSSLMRDYAD-KELNKYTKTRFASQFLSLQSVLDAEEGLHHTI 185
           V ++ K I  Y+Y+H  + + MR +   KEL +   TRF + FLSL+S++  E+ L H  
Sbjct: 323 VLEEAKIITRYIYSHASILNTMRKFTGGKELIRPRITRFVTNFLSLRSIVILEDNLKHMF 382

Query: 186 ASSTWRNLPYSKIASA*SVCDTIQSTEFWKEGNELVEFLEPLVRI 320
           A S W +  YS+   A ++   +    FWK+ +E +   EPL+RI
Sbjct: 383 AHSEWLSSIYSRRPDAQAIISLLYLDRFWKDAHEAINICEPLIRI 427


>ref|XP_004147940.1| PREDICTED: uncharacterized protein LOC101222344 [Cucumis sativus]
          Length = 673

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/105 (35%), Positives = 59/105 (56%), Gaps = 1/105 (0%)
 Frame = +3

Query: 9   VFDQGKSIVDYMYNHTIVSSLMRDYAD-KELNKYTKTRFASQFLSLQSVLDAEEGLHHTI 185
           V ++ K I  Y+Y+H  + + MR +   KEL +   TRF + FLSL+S++  E+ L H  
Sbjct: 323 VLEEAKIITRYIYSHASILNTMRKFTGGKELIRPRITRFVTNFLSLRSIVILEDNLKHMF 382

Query: 186 ASSTWRNLPYSKIASA*SVCDTIQSTEFWKEGNELVEFLEPLVRI 320
           A S W +  YS+   A ++   +    FWK+ +E +   EPL+RI
Sbjct: 383 AHSEWLSSIYSRRPDAQAIISLLYLDRFWKDAHEAINICEPLIRI 427


>ref|XP_003538648.1| PREDICTED: uncharacterized protein LOC100805582 [Glycine max]
          Length = 675

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
 Frame = +3

Query: 9   VFDQGKSIVDYMYNHTIVSSLMRDYAD-KELNKYTKTRFASQFLSLQSVLDAEEGLHHTI 185
           V ++ K+I  Y+Y+H  + ++MR +   KEL +   TRF + FLSL+S++  E+ + H  
Sbjct: 326 VLEEAKTITQYIYSHAWILNIMRKFTGGKELIRPKITRFVTNFLSLKSIVMQEDNIKHMF 385

Query: 186 ASSTWRNLPYSKIASA*SVCDTIQSTEFWKEGNELVEFLEPLVR 317
           + S W +  Y +   A ++   + S  FWK  +E V   EPLV+
Sbjct: 386 SHSEWLSSIYRRRPDAQAINSLLYSDRFWKYAHEAVSVSEPLVK 429


>ref|XP_002521049.1| DNA binding protein, putative [Ricinus communis]
           gi|223539752|gb|EEF41333.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 854

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
 Frame = +3

Query: 9   VFDQGKSIVDYMYNHTIVSSLMRDYA-DKELNKYTKTRFASQFLSLQSVLDAEEGLHHTI 185
           V +Q KS+  ++YNH+ V +LMR +   K++ +   TR A+ F  LQ + D +  L   I
Sbjct: 475 VIEQAKSVTRFVYNHSAVLNLMRKFTYGKDIVQQGLTRSATNFTMLQRMADFKLNLQTMI 534

Query: 186 ASSTWRNLPYSKIASA*SVCDTIQSTEFWKEGNELVEFLEPLVRI 320
            S  W + PYSK     ++ D I +  FW     ++    PL+R+
Sbjct: 535 TSQEWMDCPYSKQHGGLAMLDIISNRSFWSSCILIIRLTSPLIRV 579


>gb|AFW77494.1| hypothetical protein ZEAMMB73_824761 [Zea mays]
          Length = 760

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
 Frame = +3

Query: 3   QKVFDQGKSIVDYMYNHTIVSSLMRDYAD-KELNKYTKTRFASQFLSLQSVLDAEEGLHH 179
           +KV DQ KS   ++Y HT     +R + + KEL +   TRFAS FL+L S+ + ++ L  
Sbjct: 352 RKVIDQAKSFTIFVYGHTRTLECLRYFTEGKELVRPGVTRFASYFLTLNSMQEKKDQLRK 411

Query: 180 TIASSTWRNLPYSKIASA*SVCDTIQSTEFWKEGNELVEFLEPLVRI 320
            +  S W +L   K         TI S  FWK+   ++   EPLV++
Sbjct: 412 MVVHSRWDSLKDVKSKKGKEATATILSPAFWKDVKLMLAVFEPLVKV 458


Top