BLASTX nr result

ID: Cimicifuga21_contig00030260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030260
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...   168   5e-40
ref|XP_002331826.1| multidrug resistance protein ABC transporter...   166   2e-39
ref|XP_003536438.1| PREDICTED: ABC transporter C family member 1...   159   2e-37
ref|XP_002318362.1| multidrug resistance protein ABC transporter...   157   8e-37
ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   154   9e-36

>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
            gi|223547514|gb|EEF49009.1| multidrug
            resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/120 (71%), Positives = 95/120 (79%)
 Frame = +2

Query: 2    LLMSDGEILHAAPYHQLLASSLEFQVLVNAHKETAGSERHASVVSRRPIATSISEIKKAS 181
            LLMSDGEIL AAPYHQLLASS EFQ LVNAH+ETAGSER   + + +   +S  EIKK  
Sbjct: 820  LLMSDGEILRAAPYHQLLASSQEFQELVNAHRETAGSERLTDITNTQKRGSSTVEIKKTY 879

Query: 182  AEKQSKTSVGDQLIKIEERETGDAGFKPYLQYLNQNKGYLYFSLAYLAHVIFVIGQILQN 361
             EKQ K + GDQLIK EERETGD G KPYLQYLNQNKGYLYFS+A L+H+ FVIGQI QN
Sbjct: 880  VEKQLKVAKGDQLIKQEERETGDTGLKPYLQYLNQNKGYLYFSIAALSHLTFVIGQIAQN 939


>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1423

 Score =  166 bits (419), Expect = 2e-39
 Identities = 83/120 (69%), Positives = 96/120 (80%)
 Frame = +2

Query: 2    LLMSDGEILHAAPYHQLLASSLEFQVLVNAHKETAGSERHASVVSRRPIATSISEIKKAS 181
            +LMSDGEIL AAPYHQLL SS EF  LVNAHKETAGSERH  V + +   +S+ EIKK+ 
Sbjct: 763  MLMSDGEILQAAPYHQLLLSSQEFLDLVNAHKETAGSERHTEVDASQRQGSSVREIKKSY 822

Query: 182  AEKQSKTSVGDQLIKIEERETGDAGFKPYLQYLNQNKGYLYFSLAYLAHVIFVIGQILQN 361
             E Q KTS GDQLIK EE+E GD GFKPY+QYLNQNKGY+YFS+A  +H++FVIGQI QN
Sbjct: 823  VEGQIKTSQGDQLIKQEEKEVGDTGFKPYVQYLNQNKGYVYFSIAAFSHLLFVIGQITQN 882


>ref|XP_003536438.1| PREDICTED: ABC transporter C family member 10-like [Glycine max]
          Length = 1479

 Score =  159 bits (403), Expect = 2e-37
 Identities = 80/120 (66%), Positives = 95/120 (79%)
 Frame = +2

Query: 2    LLMSDGEILHAAPYHQLLASSLEFQVLVNAHKETAGSERHASVVSRRPIATSISEIKKAS 181
            LLMSDGEI+ AAPY+ LL+SS EFQ LVNAHKETAGS+R   V S +  + S  EI+K S
Sbjct: 818  LLMSDGEIIEAAPYYHLLSSSQEFQDLVNAHKETAGSDRLVEVTSPQKQSNSAREIRKTS 877

Query: 182  AEKQSKTSVGDQLIKIEERETGDAGFKPYLQYLNQNKGYLYFSLAYLAHVIFVIGQILQN 361
             E+  + S GDQLIK EERE GD GFKPY+QYLNQNKGY+YFS+A L+H+ FV+GQILQN
Sbjct: 878  TEQHYEASKGDQLIKQEEREKGDQGFKPYIQYLNQNKGYIYFSVAALSHLTFVVGQILQN 937


>ref|XP_002318362.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222859035|gb|EEE96582.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1240

 Score =  157 bits (397), Expect = 8e-37
 Identities = 81/120 (67%), Positives = 93/120 (77%)
 Frame = +2

Query: 2   LLMSDGEILHAAPYHQLLASSLEFQVLVNAHKETAGSERHASVVSRRPIATSISEIKKAS 181
           +LMSDGEIL AAPYH+LL+SS EF  LVNAHKETAGSER     + +   +S  EIKK+ 
Sbjct: 589 MLMSDGEILQAAPYHKLLSSSQEFLDLVNAHKETAGSERLPEANALQRQGSSAREIKKSY 648

Query: 182 AEKQSKTSVGDQLIKIEERETGDAGFKPYLQYLNQNKGYLYFSLAYLAHVIFVIGQILQN 361
            EKQ KTS GDQLIK EE+E GD GFKPY++YLNQNKGYLYFSLA   H++FV GQI QN
Sbjct: 649 EEKQLKTSQGDQLIKQEEKEIGDTGFKPYIEYLNQNKGYLYFSLASFGHLLFVTGQISQN 708


>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  154 bits (388), Expect = 9e-36
 Identities = 81/120 (67%), Positives = 90/120 (75%)
 Frame = +2

Query: 2    LLMSDGEILHAAPYHQLLASSLEFQVLVNAHKETAGSERHASVVSRRPIATSISEIKKAS 181
            LLMSDGEI+ AAPY QLL SS EF  LVNAHKETAGSER A V   +    S+ EI K  
Sbjct: 872  LLMSDGEIIQAAPYQQLLVSSQEFVDLVNAHKETAGSERLAEVTPEK-FENSVREINKTY 930

Query: 182  AEKQSKTSVGDQLIKIEERETGDAGFKPYLQYLNQNKGYLYFSLAYLAHVIFVIGQILQN 361
             EKQ K   GDQLIK EERE GD GFKPY+QYL+QNKGYL+FSLA L+H++FV GQI QN
Sbjct: 931  TEKQFKAPSGDQLIKQEEREIGDMGFKPYMQYLSQNKGYLFFSLAALSHILFVAGQISQN 990


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