BLASTX nr result

ID: Cimicifuga21_contig00030204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030204
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20783.3| unnamed protein product [Vitis vinifera]              249   2e-64
ref|XP_002280753.2| PREDICTED: putative RNA methyltransferase At...   244   7e-63
ref|XP_003549219.1| PREDICTED: putative RNA methyltransferase At...   241   3e-62
ref|XP_002330827.1| predicted protein [Populus trichocarpa] gi|2...   239   2e-61
gb|AFK38700.1| unknown [Lotus japonicus]                              238   4e-61

>emb|CBI20783.3| unnamed protein product [Vitis vinifera]
          Length = 180

 Score =  249 bits (635), Expect = 2e-64
 Identities = 119/160 (74%), Positives = 142/160 (88%)
 Frame = +3

Query: 3   KYSGQSVRAIPIRLITVGKKRSQGVQLLVDEYKEKLKFYCAVDDVQIRPNPKNTSNVNAQ 182
           +++ +SVR +PIR++TVGKKRS+GVQL+VDEY EKLK+YC+ DD+QIR NPKN  +V AQ
Sbjct: 17  RHTPESVRPVPIRILTVGKKRSRGVQLIVDEYIEKLKYYCSPDDIQIRSNPKNARDVKAQ 76

Query: 183 VEREDMIVMQHIRSEDWVVMLDEHGLDIGSIQMAELLGDAGNTESSTLSFCIGGPYGHGK 362
           VE ED  VM  IR +DWVVMLDEHGLD+GSIQMAELL D GNT ++ LSFCIGGPYGHG+
Sbjct: 77  VENEDTAVMGLIRPDDWVVMLDEHGLDLGSIQMAELLRDVGNTGAARLSFCIGGPYGHGE 136

Query: 363 QLRERANVTIKLSSMVLNHQIALVVLLEQLYRAWTILKGQ 482
           QLR+RAN++IKLSSMVLNHQIAL+VL+EQLYRAWTILKGQ
Sbjct: 137 QLRKRANISIKLSSMVLNHQIALLVLMEQLYRAWTILKGQ 176


>ref|XP_002280753.2| PREDICTED: putative RNA methyltransferase At5g10620 [Vitis
           vinifera]
          Length = 217

 Score =  244 bits (622), Expect = 7e-63
 Identities = 117/153 (76%), Positives = 136/153 (88%)
 Frame = +3

Query: 24  RAIPIRLITVGKKRSQGVQLLVDEYKEKLKFYCAVDDVQIRPNPKNTSNVNAQVEREDMI 203
           R +PIR++TVGKKRS+GVQL+VDEY EKLK+YC+ DD+QIR NPKN  +V AQVE ED  
Sbjct: 61  RPVPIRILTVGKKRSRGVQLIVDEYIEKLKYYCSPDDIQIRSNPKNARDVKAQVENEDTA 120

Query: 204 VMQHIRSEDWVVMLDEHGLDIGSIQMAELLGDAGNTESSTLSFCIGGPYGHGKQLRERAN 383
           VM  IR +DWVVMLDEHGLD+GSIQMAELL D GNT ++ LSFCIGGPYGHG+QLR+RAN
Sbjct: 121 VMGLIRPDDWVVMLDEHGLDLGSIQMAELLRDVGNTGAARLSFCIGGPYGHGEQLRKRAN 180

Query: 384 VTIKLSSMVLNHQIALVVLLEQLYRAWTILKGQ 482
           ++IKLSSMVLNHQIAL+VL+EQLYRAWTILKGQ
Sbjct: 181 ISIKLSSMVLNHQIALLVLMEQLYRAWTILKGQ 213


>ref|XP_003549219.1| PREDICTED: putative RNA methyltransferase At5g10620-like [Glycine
           max]
          Length = 183

 Score =  241 bits (616), Expect = 3e-62
 Identities = 114/160 (71%), Positives = 141/160 (88%)
 Frame = +3

Query: 3   KYSGQSVRAIPIRLITVGKKRSQGVQLLVDEYKEKLKFYCAVDDVQIRPNPKNTSNVNAQ 182
           KY GQSVRA+PIR+++VGKKRS+G+QL+VDEY +KL++YC V+D QIRPNP+N  +  AQ
Sbjct: 20  KYEGQSVRALPIRILSVGKKRSRGLQLMVDEYADKLRYYCNVEDAQIRPNPRNARDQRAQ 79

Query: 183 VEREDMIVMQHIRSEDWVVMLDEHGLDIGSIQMAELLGDAGNTESSTLSFCIGGPYGHGK 362
           V+ ED  VM  IRS+DWVVMLDE G DI S QMAEL+GDAGNT +S LSFCIGGPYGHG+
Sbjct: 80  VDAEDEAVMNLIRSDDWVVMLDERGQDIESEQMAELVGDAGNTGASRLSFCIGGPYGHGR 139

Query: 363 QLRERANVTIKLSSMVLNHQIALVVLLEQLYRAWTILKGQ 482
           ++R+RAN++IKLSS+VLNHQIAL+VL+EQLYR+WTILKGQ
Sbjct: 140 KMRQRANLSIKLSSLVLNHQIALLVLMEQLYRSWTILKGQ 179


>ref|XP_002330827.1| predicted protein [Populus trichocarpa] gi|222872629|gb|EEF09760.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  239 bits (610), Expect = 2e-61
 Identities = 116/160 (72%), Positives = 139/160 (86%)
 Frame = +3

Query: 3   KYSGQSVRAIPIRLITVGKKRSQGVQLLVDEYKEKLKFYCAVDDVQIRPNPKNTSNVNAQ 182
           KY+GQSVRA+PIR+ITVGKKRS GVQLLV+EY  KLK YC++ D+ IR NP+N  +  AQ
Sbjct: 26  KYTGQSVRALPIRIITVGKKRSAGVQLLVEEYTNKLKNYCSLHDLPIRSNPRNARDEKAQ 85

Query: 183 VEREDMIVMQHIRSEDWVVMLDEHGLDIGSIQMAELLGDAGNTESSTLSFCIGGPYGHGK 362
           V+ ED  VM  IRS+DWVV+LDE G DIGS QMAEL+GDAGNT +S LSFCIGGPYGHG+
Sbjct: 86  VDDEDKAVMNLIRSDDWVVLLDERGRDIGSEQMAELIGDAGNTGASRLSFCIGGPYGHGQ 145

Query: 363 QLRERANVTIKLSSMVLNHQIALVVLLEQLYRAWTILKGQ 482
           Q+R+RAN++I+LSSMVLNHQIAL+VL+EQLYR+WTILKGQ
Sbjct: 146 QIRKRANISIRLSSMVLNHQIALLVLVEQLYRSWTILKGQ 185


>gb|AFK38700.1| unknown [Lotus japonicus]
          Length = 194

 Score =  238 bits (607), Expect = 4e-61
 Identities = 112/159 (70%), Positives = 141/159 (88%)
 Frame = +3

Query: 6   YSGQSVRAIPIRLITVGKKRSQGVQLLVDEYKEKLKFYCAVDDVQIRPNPKNTSNVNAQV 185
           Y+ QSV+A+PIR+++VGKKRS+G+QLLVD+Y EK+K+YC+V+DVQIRPNP+N  +  AQV
Sbjct: 32  YAAQSVKALPIRILSVGKKRSRGLQLLVDDYIEKIKYYCSVEDVQIRPNPRNARDHRAQV 91

Query: 186 EREDMIVMQHIRSEDWVVMLDEHGLDIGSIQMAELLGDAGNTESSTLSFCIGGPYGHGKQ 365
           + ED  VM  IRS+DWVVMLDE G DIGS QMAEL+G A NT +S LSFCIGGPYGHG++
Sbjct: 92  DDEDTAVMNIIRSDDWVVMLDERGQDIGSEQMAELVGGASNTGASRLSFCIGGPYGHGRK 151

Query: 366 LRERANVTIKLSSMVLNHQIALVVLLEQLYRAWTILKGQ 482
           +RERAN++IKLSS+VLNHQIAL+VL+EQLYR+WTIL+GQ
Sbjct: 152 IRERANISIKLSSLVLNHQIALLVLMEQLYRSWTILRGQ 190


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