BLASTX nr result

ID: Cimicifuga21_contig00030201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030201
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323764.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002525861.1| caspase, putative [Ricinus communis] gi|2235...    77   2e-12
ref|XP_003608446.1| Metacaspase-3 [Medicago truncatula] gi|35550...    72   4e-11
ref|XP_003543919.1| PREDICTED: metacaspase-1-like [Glycine max]        70   2e-10
dbj|BAK06670.1| predicted protein [Hordeum vulgare subsp. vulgare]     62   5e-08

>ref|XP_002323764.1| predicted protein [Populus trichocarpa] gi|222866766|gb|EEF03897.1|
           predicted protein [Populus trichocarpa]
          Length = 384

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 48/118 (40%), Positives = 72/118 (61%), Gaps = 2/118 (1%)
 Frame = +2

Query: 14  QKCNGCGMQLVVPQEAKSMRCAWCQSITPVRPLDPFDRTQDPVRQAATWVKGFITNVSSK 193
           +KC+ CG+QLVVP +A+++RCA CQ++T V    P  + ++    A     G I+ VSS 
Sbjct: 4   EKCSRCGVQLVVPPDAQAIRCAVCQAVTRVHSYYPLAQARE---SAGRITSGLISMVSSN 60

Query: 194 IDTIATSI--NSYPQGTTGSFYGNYAYNPHVSRPLSFPSVHGKRRALLCGLCYRTRRY 361
           I T+ +S+  +SYP    G +Y      P +  PL  PS+HG++RALLCG+ YR + Y
Sbjct: 61  ITTMTSSVSSSSYPVPGYGGYYAQPPIRPVLQLPL--PSMHGRKRALLCGVSYRGKSY 116


>ref|XP_002525861.1| caspase, putative [Ricinus communis] gi|223534866|gb|EEF36555.1|
           caspase, putative [Ricinus communis]
          Length = 378

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 5/113 (4%)
 Frame = +2

Query: 38  QLVVPQEAKSMRCAWCQSITPVRPLD-PFDRTQDPVRQAATWVKGFITNVSSKIDTIATS 214
           QL+VP EA+S+RC+ CQ+IT V+P D P  + +D +  AAT +   ++       T+   
Sbjct: 4   QLLVPAEAQSIRCSLCQAITKVQPHDHPLAQVRDTINHAATRIINMVST------TVTGP 57

Query: 215 INSYPQGTTGSFYGNYAY--NPHVSRP--LSFPSVHGKRRALLCGLCYRTRRY 361
           ++SY  G  G     Y Y   P   RP  L  PS HG++RA+LCG+ YR + Y
Sbjct: 58  VSSYAGGGGGGTTYGYGYYVQPQPPRPVLLPLPSAHGRKRAVLCGVSYRGKSY 110


>ref|XP_003608446.1| Metacaspase-3 [Medicago truncatula] gi|355509501|gb|AES90643.1|
           Metacaspase-3 [Medicago truncatula]
          Length = 163

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 40/120 (33%), Positives = 65/120 (54%)
 Frame = +2

Query: 2   AGRRQKCNGCGMQLVVPQEAKSMRCAWCQSITPVRPLDPFDRTQDPVRQAATWVKGFITN 181
           A ++ +CN CG  LVVP E ++ +C+ C  IT V+ +   ++  + +   A   +GF+  
Sbjct: 2   ASKQHRCNQCGTMLVVPIEVQAFKCSMCNGITHVQSI---NQAYNSLNHIAGLFRGFMNT 58

Query: 182 VSSKIDTIATSINSYPQGTTGSFYGNYAYNPHVSRPLSFPSVHGKRRALLCGLCYRTRRY 361
           +++   + A + NS   GTT   Y +       S PL  PS +G +RA+LCG+CY  R Y
Sbjct: 59  ITT---SSAINSNSSNYGTTHFGYYHQPQPLRPSYPLIPPSPYGSKRAVLCGICYHGRSY 115


>ref|XP_003543919.1| PREDICTED: metacaspase-1-like [Glycine max]
          Length = 383

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
 Frame = +2

Query: 2   AGRRQKCNGCGMQLVVPQEAKSMRCAWCQSITPVRP-LDPFDRTQDPVRQAATWVKGFIT 178
           A R+++CN CG+ L+VP E     CA C  IT +RP   P+ +  +     A   +GF+ 
Sbjct: 2   ASRQERCNQCGILLMVPPEVHVFECAVCHGITQIRPTAGPWSQAYNSFHHLAGRFRGFVN 61

Query: 179 NVSSKIDTIATSINSYPQ--GTTGSFYGNYAYNPHVSRPLSFPSVHGKRRALLCGLCYRT 352
            +      + +S+NS P   GTT  F G Y   P   RP     V+G +RA+LCG+ Y  
Sbjct: 62  TM------MTSSVNSNPSYYGTTHEF-GYYPQPPQSLRPSY--HVYGSKRAVLCGIRYHG 112

Query: 353 RRY 361
           + Y
Sbjct: 113 KSY 115


>dbj|BAK06670.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 375

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/122 (34%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
 Frame = +2

Query: 2   AGRRQKCNGCGMQLVVPQEAKSMRCAWCQSITPV--RPLDPFDRTQDPVRQAATWVKGFI 175
           A  RQ C+ CG  +  P  A+S+RCA C ++T V  RP     + Q  + QA  ++KG +
Sbjct: 6   ASSRQMCSRCGAYISAPPGARSVRCALCHTMTRVERRP-----QHQGGLHQAVCFIKGLL 60

Query: 176 TNVSSKIDTIATSINSYPQGTTGSFYGNYAYNPHVSRPLSFPSVHGKRRALLCGLCYRTR 355
               S+  T A+S         GS      Y      P S+PS  GK+RALL G+ Y   
Sbjct: 61  FGAPSRSPTPASS---------GSMRAGDPYR----LPASYPSARGKKRALLVGISYSFT 107

Query: 356 RY 361
           +Y
Sbjct: 108 KY 109


Top