BLASTX nr result

ID: Cimicifuga21_contig00030180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030180
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271262.2| PREDICTED: probable LRR receptor-like serine...   108   5e-22
emb|CBI30512.3| unnamed protein product [Vitis vinifera]              108   5e-22
ref|XP_002528851.1| serine-threonine protein kinase, plant-type,...   101   7e-20
ref|XP_002336269.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002528849.1| serine-threonine protein kinase, plant-type,...   100   2e-19

>ref|XP_002271262.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At3g47570-like [Vitis vinifera]
          Length = 1100

 Score =  108 bits (270), Expect = 5e-22
 Identities = 57/99 (57%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
 Frame = +3

Query: 84  LFALFLFPALNYSQGLRRL---DNTTDQLSLLSFKSHITNDPLGVLQNWNTNTSFCNWRG 254
           +  L LF  LN+SQ   R+   +N+TDQ  LLSFK+ +T DP GVL  W  NTSFCNW G
Sbjct: 104 ILLLALFFTLNHSQASLRIPHFNNSTDQDVLLSFKAQVTKDPNGVLDTWKPNTSFCNWHG 163

Query: 255 VTCDITNQRVTGLNLENLNLAGTISPYIANLSFLSYLSL 371
           V C+    RVTGL L NL LAGTI+ YIANLSFL  L L
Sbjct: 164 VLCNPMKNRVTGLTLRNLTLAGTITSYIANLSFLRRLDL 202


>emb|CBI30512.3| unnamed protein product [Vitis vinifera]
          Length = 661

 Score =  108 bits (270), Expect = 5e-22
 Identities = 57/99 (57%), Positives = 66/99 (66%), Gaps = 3/99 (3%)
 Frame = +3

Query: 84  LFALFLFPALNYSQGLRRL---DNTTDQLSLLSFKSHITNDPLGVLQNWNTNTSFCNWRG 254
           +  L LF  LN+SQ   R+   +N+TDQ  LLSFK+ +T DP GVL  W  NTSFCNW G
Sbjct: 7   ILLLALFFTLNHSQASLRIPHFNNSTDQDVLLSFKAQVTKDPNGVLDTWKPNTSFCNWHG 66

Query: 255 VTCDITNQRVTGLNLENLNLAGTISPYIANLSFLSYLSL 371
           V C+    RVTGL L NL LAGTI+ YIANLSFL  L L
Sbjct: 67  VLCNPMKNRVTGLTLRNLTLAGTITSYIANLSFLRRLDL 105


>ref|XP_002528851.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223531702|gb|EEF33525.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 988

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/98 (48%), Positives = 66/98 (67%)
 Frame = +3

Query: 84  LFALFLFPALNYSQGLRRLDNTTDQLSLLSFKSHITNDPLGVLQNWNTNTSFCNWRGVTC 263
           +F L  F  L  +  +R  +N TD+L+LL FK  I +DPLG++ +WN++  FC W GVTC
Sbjct: 23  IFQLLSFAVLPAAFAMRSANNETDRLALLEFKDKIADDPLGMMSSWNSSLHFCQWHGVTC 82

Query: 264 DITNQRVTGLNLENLNLAGTISPYIANLSFLSYLSLHN 377
              +QRVT L+L +L L+G+ISPY+ NLSFL  L L N
Sbjct: 83  GRRHQRVTMLDLGSLKLSGSISPYVGNLSFLRKLYLEN 120


>ref|XP_002336269.1| predicted protein [Populus trichocarpa] gi|222833133|gb|EEE71610.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  100 bits (248), Expect = 2e-19
 Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 10/110 (9%)
 Frame = +3

Query: 78  WILFALFLF----------PALNYSQGLRRLDNTTDQLSLLSFKSHITNDPLGVLQNWNT 227
           W  F ++ F          P  +     R   N TDQL+L+ FK+HITNDPLGVL++WN 
Sbjct: 8   WPFFGIYTFLLLSFPGLQVPCFSAEATARIAKNETDQLALVEFKTHITNDPLGVLRSWNN 67

Query: 228 NTSFCNWRGVTCDITNQRVTGLNLENLNLAGTISPYIANLSFLSYLSLHN 377
           +  FC W GV C   +QRV  L+L +  LAG ISP++ NLSFL  L L N
Sbjct: 68  SIHFCQWHGVLCGRRHQRVIALDLGSYKLAGYISPHVGNLSFLRLLDLRN 117


>ref|XP_002528849.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223531700|gb|EEF33523.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 834

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/95 (49%), Positives = 64/95 (67%)
 Frame = +3

Query: 93  LFLFPALNYSQGLRRLDNTTDQLSLLSFKSHITNDPLGVLQNWNTNTSFCNWRGVTCDIT 272
           L  F  L+ +  +   +N TD+L+LL FK  IT+DPLGV+ +WN +  FC W G+TC   
Sbjct: 26  LLSFTVLSATFAIGNANNQTDRLALLDFKDKITDDPLGVVSSWNRSLHFCKWYGITCSRR 85

Query: 273 NQRVTGLNLENLNLAGTISPYIANLSFLSYLSLHN 377
           +QRVT L+L +L L+G+ISPY+ NLSFL  L L N
Sbjct: 86  HQRVTRLDLSSLKLSGSISPYVGNLSFLRELYLEN 120


Top