BLASTX nr result

ID: Cimicifuga21_contig00030163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030163
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634247.1| PREDICTED: uncharacterized protein LOC100853...    74   9e-12
emb|CAN75324.1| hypothetical protein VITISV_003766 [Vitis vinifera]    74   9e-12
ref|XP_002511382.1| conserved hypothetical protein [Ricinus comm...    70   1e-10
emb|CBI15010.3| unnamed protein product [Vitis vinifera]               69   3e-10
ref|XP_004155081.1| PREDICTED: uncharacterized LOC101208306 [Cuc...    66   3e-09

>ref|XP_003634247.1| PREDICTED: uncharacterized protein LOC100853506 [Vitis vinifera]
          Length = 1144

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/64 (64%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +1

Query: 325 SPDRFDEFSPRVHQKPEVTNPSPDASDYSSCGESEFERYCSANSVMGTPSLC-SSVGTFN 501
           SPD   EF P   QK   ++ SP  S YSSCGESEF+RYCSANSVMGTPS+C SS GTFN
Sbjct: 11  SPDPLHEFVPFQGQK---SDDSP-LSQYSSCGESEFDRYCSANSVMGTPSMCSSSFGTFN 66

Query: 502 DFLD 513
           + +D
Sbjct: 67  ECID 70


>emb|CAN75324.1| hypothetical protein VITISV_003766 [Vitis vinifera]
          Length = 1333

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 41/64 (64%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
 Frame = +1

Query: 325 SPDRFDEFSPRVHQKPEVTNPSPDASDYSSCGESEFERYCSANSVMGTPSLC-SSVGTFN 501
           SPD   EF P   QK   ++ SP  S YSSCGESEF+RYCSANSVMGTPS+C SS GTFN
Sbjct: 16  SPDPLHEFVPFQGQK---SDDSP-LSQYSSCGESEFDRYCSANSVMGTPSMCSSSFGTFN 71

Query: 502 DFLD 513
           + +D
Sbjct: 72  ECID 75


>ref|XP_002511382.1| conserved hypothetical protein [Ricinus communis]
           gi|223550497|gb|EEF51984.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1061

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 39/65 (60%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
 Frame = +1

Query: 325 SPDRFDEFSPRVHQKPEVTNPSPDA-SDYSSCG-ESEFERYCSANSVMGTPSLCSSVGTF 498
           SPD FD F+P+        + SP + S YSSCG ESEFERYCSANSVMGTPS CSS G  
Sbjct: 9   SPDPFDSFTPKT-----TDDVSPGSLSRYSSCGGESEFERYCSANSVMGTPSFCSSFGPA 63

Query: 499 NDFLD 513
           ND ++
Sbjct: 64  NDRIE 68


>emb|CBI15010.3| unnamed protein product [Vitis vinifera]
          Length = 1008

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 36/63 (57%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
 Frame = +1

Query: 328 PDRFDEFSPRVHQKPEVTNPSPDASDYSSCGESEFERYCSANSVMGTPSLC-SSVGTFND 504
           PD  D   P+    P         S YSSCGESEF+RYCSANSVMGTPS+C SS GTFN+
Sbjct: 33  PDPIDTAIPKSDDSP--------LSQYSSCGESEFDRYCSANSVMGTPSMCSSSFGTFNE 84

Query: 505 FLD 513
            +D
Sbjct: 85  CID 87


>ref|XP_004155081.1| PREDICTED: uncharacterized LOC101208306 [Cucumis sativus]
          Length = 1117

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = +1

Query: 388 SPDASDYSSCGESEFERYCSANSVMGTPSLCSSVGTFNDFLD 513
           SP +S YSSCGESEFERYCSANS MGTPS+ S++  FND  D
Sbjct: 38  SPASSRYSSCGESEFERYCSANSAMGTPSMRSTITVFNDCTD 79


Top