BLASTX nr result
ID: Cimicifuga21_contig00030141
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00030141 (354 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281044.2| PREDICTED: uncharacterized protein LOC100261... 52 1e-09 emb|CBI20823.3| unnamed protein product [Vitis vinifera] 52 1e-09 emb|CAN64247.1| hypothetical protein VITISV_039945 [Vitis vinifera] 52 1e-09 ref|XP_002330559.1| predicted protein [Populus trichocarpa] gi|2... 44 2e-06 >ref|XP_002281044.2| PREDICTED: uncharacterized protein LOC100261159 [Vitis vinifera] Length = 1460 Score = 52.4 bits (124), Expect(2) = 1e-09 Identities = 26/55 (47%), Positives = 35/55 (63%) Frame = -1 Query: 210 LTHTSYKFLWMHISDSYLMLKMYHVFASLCGSEYVNLSIHS*IMTVTRSIVTLLE 46 + SY MH SDS L+L + HVFA +CG +Y LS + IMTV +S+VT+ E Sbjct: 1110 ICEASYDIFRMHRSDSSLLLTILHVFAHVCGKKYFTLSNYCLIMTVMKSLVTISE 1164 Score = 35.0 bits (79), Expect(2) = 1e-09 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = -2 Query: 344 EQYFRCDSQXXXXXXXXXXXXXSETVTADKLVAGSFILASICATT*HI 201 E + CDS+ ET + +LVAGS ILASIC HI Sbjct: 1060 ESFVVCDSRFSILVDGVDRIMSFETASTHQLVAGSIILASICTAIDHI 1107 >emb|CBI20823.3| unnamed protein product [Vitis vinifera] Length = 884 Score = 52.4 bits (124), Expect(2) = 1e-09 Identities = 26/55 (47%), Positives = 35/55 (63%) Frame = -1 Query: 210 LTHTSYKFLWMHISDSYLMLKMYHVFASLCGSEYVNLSIHS*IMTVTRSIVTLLE 46 + SY MH SDS L+L + HVFA +CG +Y LS + IMTV +S+VT+ E Sbjct: 534 ICEASYDIFRMHRSDSSLLLTILHVFAHVCGKKYFTLSNYCLIMTVMKSLVTISE 588 Score = 35.0 bits (79), Expect(2) = 1e-09 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = -2 Query: 344 EQYFRCDSQXXXXXXXXXXXXXSETVTADKLVAGSFILASICATT*HI 201 E + CDS+ ET + +LVAGS ILASIC HI Sbjct: 484 ESFVVCDSRFSILVDGVDRIMSFETASTHQLVAGSIILASICTAIDHI 531 >emb|CAN64247.1| hypothetical protein VITISV_039945 [Vitis vinifera] Length = 441 Score = 52.4 bits (124), Expect(2) = 1e-09 Identities = 26/55 (47%), Positives = 35/55 (63%) Frame = -1 Query: 210 LTHTSYKFLWMHISDSYLMLKMYHVFASLCGSEYVNLSIHS*IMTVTRSIVTLLE 46 + SY MH SDS L+L + HVFA +CG +Y LS + IMTV +S+VT+ E Sbjct: 91 ICEASYDIFRMHRSDSSLLLTILHVFAHVCGKKYFTLSNYCLIMTVMKSLVTISE 145 Score = 35.0 bits (79), Expect(2) = 1e-09 Identities = 19/48 (39%), Positives = 23/48 (47%) Frame = -2 Query: 344 EQYFRCDSQXXXXXXXXXXXXXSETVTADKLVAGSFILASICATT*HI 201 E + CDS+ ET + +LVAGS ILASIC HI Sbjct: 41 ESFVVCDSRFSILVDGVDRIMSFETASTHQLVAGSIILASICTAIDHI 88 >ref|XP_002330559.1| predicted protein [Populus trichocarpa] gi|222872117|gb|EEF09248.1| predicted protein [Populus trichocarpa] Length = 1681 Score = 44.3 bits (103), Expect(2) = 2e-06 Identities = 21/55 (38%), Positives = 32/55 (58%) Frame = -1 Query: 210 LTHTSYKFLWMHISDSYLMLKMYHVFASLCGSEYVNLSIHS*IMTVTRSIVTLLE 46 L SY L MH D+ +L + H+F+ L G ++ +L H+ MTV +SI+ LE Sbjct: 1355 LCQASYSLLLMHKCDTVFVLTILHIFSYLAGEKFFSLREHNLTMTVLKSIIMFLE 1409 Score = 32.0 bits (71), Expect(2) = 2e-06 Identities = 18/38 (47%), Positives = 21/38 (55%) Frame = -2 Query: 329 CDSQXXXXXXXXXXXXXSETVTADKLVAGSFILASICA 216 CDS S++ +AD LVAGS ILASICA Sbjct: 1310 CDSMIDILLDGVNIKFASKSASADLLVAGSIILASICA 1347