BLASTX nr result
ID: Cimicifuga21_contig00030116
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00030116 (601 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002273940.1| PREDICTED: uncharacterized protein LOC100255... 115 1e-26 ref|XP_002299363.1| predicted protein [Populus trichocarpa] gi|2... 108 5e-24 ref|XP_002303737.1| predicted protein [Populus trichocarpa] gi|2... 107 2e-21 ref|XP_002512700.1| conserved hypothetical protein [Ricinus comm... 106 4e-21 gb|ABK21062.1| unknown [Picea sitchensis] 77 2e-12 >ref|XP_002273940.1| PREDICTED: uncharacterized protein LOC100255664 [Vitis vinifera] Length = 272 Score = 115 bits (288), Expect(2) = 1e-26 Identities = 62/120 (51%), Positives = 76/120 (63%), Gaps = 1/120 (0%) Frame = -2 Query: 357 RPIKASVLMLQFPKHLVCHSHSFYIGQKIQPLSPKDKLQLGHNYFLLPVHFFQXXXXXXX 178 RPI S LML+FPKH VCHS SFYIGQKI LS D+LQLGH YFLLP HFFQ Sbjct: 52 RPIHVSELMLEFPKHRVCHSDSFYIGQKIPALSEDDELQLGHKYFLLPKHFFQSVLSFVT 111 Query: 177 XXXXXXXXXXXXXXXXSPMATNN-NTFVVNREIGSCQAFDIRKAPSGCLQVRVSDEFVSK 1 S M+ ++ N F+ ++ SCQ FDI+K PSGCL++RVSDEF+++ Sbjct: 112 VASFASSQSHPSPDSSSLMSRDSKNAFL--KKAASCQPFDIQKTPSGCLRIRVSDEFIAQ 169 Score = 29.6 bits (65), Expect(2) = 1e-26 Identities = 17/57 (29%), Positives = 27/57 (47%) Frame = -3 Query: 518 MGMKLWNLQAFLNRYRCLGGHDHFSSSLPVHHELRRAEAVVKVIRSDGVVNIYRAPL 348 MG+K NLQ + + S + + E +K+I+SDG+V IY P+ Sbjct: 1 MGIKFLNLQTIPWCFHLMSNP---VSCMHLQPEAPEGSGTIKLIKSDGIVKIYDRPI 54 >ref|XP_002299363.1| predicted protein [Populus trichocarpa] gi|222846621|gb|EEE84168.1| predicted protein [Populus trichocarpa] Length = 267 Score = 108 bits (271), Expect(2) = 5e-24 Identities = 58/119 (48%), Positives = 73/119 (61%) Frame = -2 Query: 357 RPIKASVLMLQFPKHLVCHSHSFYIGQKIQPLSPKDKLQLGHNYFLLPVHFFQXXXXXXX 178 RPI S LM++FPKHLVCHS SFYIGQKI LS D LQLGH YFLLP H FQ Sbjct: 50 RPIYVSELMVEFPKHLVCHSDSFYIGQKIPALSENDLLQLGHKYFLLPKHCFQSVLSFVT 109 Query: 177 XXXXXXXXXXXXXXXXSPMATNNNTFVVNREIGSCQAFDIRKAPSGCLQVRVSDEFVSK 1 +++ N F+ ++ +CQ FDI K+P+GCL++RVSDEF+S+ Sbjct: 110 IASFASSSLQPQP------SSSRNAFL--KKAATCQPFDILKSPNGCLRIRVSDEFLSQ 160 Score = 27.7 bits (60), Expect(2) = 5e-24 Identities = 19/57 (33%), Positives = 28/57 (49%) Frame = -3 Query: 518 MGMKLWNLQAFLNRYRCLGGHDHFSSSLPVHHELRRAEAVVKVIRSDGVVNIYRAPL 348 MG++ NLQ + +G S L + E +K+IRSDG+V IY P+ Sbjct: 1 MGIRFLNLQIIPWCFHLMGNP---ISCLQIQSE--PPAGTIKLIRSDGLVKIYDRPI 52 >ref|XP_002303737.1| predicted protein [Populus trichocarpa] gi|222841169|gb|EEE78716.1| predicted protein [Populus trichocarpa] Length = 272 Score = 107 bits (266), Expect = 2e-21 Identities = 55/119 (46%), Positives = 74/119 (62%) Frame = -2 Query: 357 RPIKASVLMLQFPKHLVCHSHSFYIGQKIQPLSPKDKLQLGHNYFLLPVHFFQXXXXXXX 178 RP+ S LM++FPKHLVCHS SFYIGQKI LS D+LQLGH YFLLP FQ Sbjct: 51 RPVYVSELMVEFPKHLVCHSDSFYIGQKIPALSENDQLQLGHKYFLLPKDCFQSVLSFVT 110 Query: 177 XXXXXXXXXXXXXXXXSPMATNNNTFVVNREIGSCQAFDIRKAPSGCLQVRVSDEFVSK 1 +++ N F+ ++ +CQ FDI+K+P+GCL++RVSD+F+S+ Sbjct: 111 IASFTSSSLQPQP------SSSRNAFL--KKAATCQPFDIQKSPNGCLRIRVSDDFISQ 161 >ref|XP_002512700.1| conserved hypothetical protein [Ricinus communis] gi|223548661|gb|EEF50152.1| conserved hypothetical protein [Ricinus communis] Length = 274 Score = 106 bits (264), Expect = 4e-21 Identities = 56/119 (47%), Positives = 73/119 (61%) Frame = -2 Query: 357 RPIKASVLMLQFPKHLVCHSHSFYIGQKIQPLSPKDKLQLGHNYFLLPVHFFQXXXXXXX 178 RPI S L+ ++PKHLVC S SFYIGQKI LS D+LQLGH YFLLP H FQ Sbjct: 50 RPIHVSELLHEYPKHLVCRSDSFYIGQKIPALSENDQLQLGHKYFLLPKHCFQ-SVLSFV 108 Query: 177 XXXXXXXXXXXXXXXXSPMATNNNTFVVNREIGSCQAFDIRKAPSGCLQVRVSDEFVSK 1 S ++T + ++ +C+AFDI+K+PSGCL++RVSDEF+S+ Sbjct: 109 TIASFVTTSQPQLPHSSTSTPRDSTNALLKKAATCRAFDIQKSPSGCLRIRVSDEFISQ 167 >gb|ABK21062.1| unknown [Picea sitchensis] Length = 193 Score = 77.0 bits (188), Expect = 2e-12 Identities = 48/119 (40%), Positives = 62/119 (52%), Gaps = 8/119 (6%) Frame = -2 Query: 333 MLQFPKHLVCHSHSFYIGQKIQPLSPKDKLQLGHNYFLLPVHFFQXXXXXXXXXXXXXXX 154 M FP+HLVCHSHSFYIGQK LSP +L+LG+ YFLLP HFFQ Sbjct: 1 MQGFPQHLVCHSHSFYIGQKTSALSPNGQLKLGNRYFLLPDHFFQ--------SPLSLVS 52 Query: 153 XXXXXXXXSPMATNNNTFVVNREIGS-------CQAFDIRKAPSG-CLQVRVSDEFVSK 1 P+A + T V+ + S CQ F+I + G L++R+ EF+SK Sbjct: 53 LSALISPPPPIAPSIPTARVSAPLRSFGRAAVLCQPFEILNSDGGRGLRIRIHPEFISK 111