BLASTX nr result

ID: Cimicifuga21_contig00030116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030116
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273940.1| PREDICTED: uncharacterized protein LOC100255...   115   1e-26
ref|XP_002299363.1| predicted protein [Populus trichocarpa] gi|2...   108   5e-24
ref|XP_002303737.1| predicted protein [Populus trichocarpa] gi|2...   107   2e-21
ref|XP_002512700.1| conserved hypothetical protein [Ricinus comm...   106   4e-21
gb|ABK21062.1| unknown [Picea sitchensis]                              77   2e-12

>ref|XP_002273940.1| PREDICTED: uncharacterized protein LOC100255664 [Vitis vinifera]
          Length = 272

 Score =  115 bits (288), Expect(2) = 1e-26
 Identities = 62/120 (51%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
 Frame = -2

Query: 357 RPIKASVLMLQFPKHLVCHSHSFYIGQKIQPLSPKDKLQLGHNYFLLPVHFFQXXXXXXX 178
           RPI  S LML+FPKH VCHS SFYIGQKI  LS  D+LQLGH YFLLP HFFQ       
Sbjct: 52  RPIHVSELMLEFPKHRVCHSDSFYIGQKIPALSEDDELQLGHKYFLLPKHFFQSVLSFVT 111

Query: 177 XXXXXXXXXXXXXXXXSPMATNN-NTFVVNREIGSCQAFDIRKAPSGCLQVRVSDEFVSK 1
                           S M+ ++ N F+  ++  SCQ FDI+K PSGCL++RVSDEF+++
Sbjct: 112 VASFASSQSHPSPDSSSLMSRDSKNAFL--KKAASCQPFDIQKTPSGCLRIRVSDEFIAQ 169



 Score = 29.6 bits (65), Expect(2) = 1e-26
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -3

Query: 518 MGMKLWNLQAFLNRYRCLGGHDHFSSSLPVHHELRRAEAVVKVIRSDGVVNIYRAPL 348
           MG+K  NLQ     +  +       S + +  E       +K+I+SDG+V IY  P+
Sbjct: 1   MGIKFLNLQTIPWCFHLMSNP---VSCMHLQPEAPEGSGTIKLIKSDGIVKIYDRPI 54


>ref|XP_002299363.1| predicted protein [Populus trichocarpa] gi|222846621|gb|EEE84168.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score =  108 bits (271), Expect(2) = 5e-24
 Identities = 58/119 (48%), Positives = 73/119 (61%)
 Frame = -2

Query: 357 RPIKASVLMLQFPKHLVCHSHSFYIGQKIQPLSPKDKLQLGHNYFLLPVHFFQXXXXXXX 178
           RPI  S LM++FPKHLVCHS SFYIGQKI  LS  D LQLGH YFLLP H FQ       
Sbjct: 50  RPIYVSELMVEFPKHLVCHSDSFYIGQKIPALSENDLLQLGHKYFLLPKHCFQSVLSFVT 109

Query: 177 XXXXXXXXXXXXXXXXSPMATNNNTFVVNREIGSCQAFDIRKAPSGCLQVRVSDEFVSK 1
                              +++ N F+  ++  +CQ FDI K+P+GCL++RVSDEF+S+
Sbjct: 110 IASFASSSLQPQP------SSSRNAFL--KKAATCQPFDILKSPNGCLRIRVSDEFLSQ 160



 Score = 27.7 bits (60), Expect(2) = 5e-24
 Identities = 19/57 (33%), Positives = 28/57 (49%)
 Frame = -3

Query: 518 MGMKLWNLQAFLNRYRCLGGHDHFSSSLPVHHELRRAEAVVKVIRSDGVVNIYRAPL 348
           MG++  NLQ     +  +G      S L +  E       +K+IRSDG+V IY  P+
Sbjct: 1   MGIRFLNLQIIPWCFHLMGNP---ISCLQIQSE--PPAGTIKLIRSDGLVKIYDRPI 52


>ref|XP_002303737.1| predicted protein [Populus trichocarpa] gi|222841169|gb|EEE78716.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  107 bits (266), Expect = 2e-21
 Identities = 55/119 (46%), Positives = 74/119 (62%)
 Frame = -2

Query: 357 RPIKASVLMLQFPKHLVCHSHSFYIGQKIQPLSPKDKLQLGHNYFLLPVHFFQXXXXXXX 178
           RP+  S LM++FPKHLVCHS SFYIGQKI  LS  D+LQLGH YFLLP   FQ       
Sbjct: 51  RPVYVSELMVEFPKHLVCHSDSFYIGQKIPALSENDQLQLGHKYFLLPKDCFQSVLSFVT 110

Query: 177 XXXXXXXXXXXXXXXXSPMATNNNTFVVNREIGSCQAFDIRKAPSGCLQVRVSDEFVSK 1
                              +++ N F+  ++  +CQ FDI+K+P+GCL++RVSD+F+S+
Sbjct: 111 IASFTSSSLQPQP------SSSRNAFL--KKAATCQPFDIQKSPNGCLRIRVSDDFISQ 161


>ref|XP_002512700.1| conserved hypothetical protein [Ricinus communis]
           gi|223548661|gb|EEF50152.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 274

 Score =  106 bits (264), Expect = 4e-21
 Identities = 56/119 (47%), Positives = 73/119 (61%)
 Frame = -2

Query: 357 RPIKASVLMLQFPKHLVCHSHSFYIGQKIQPLSPKDKLQLGHNYFLLPVHFFQXXXXXXX 178
           RPI  S L+ ++PKHLVC S SFYIGQKI  LS  D+LQLGH YFLLP H FQ       
Sbjct: 50  RPIHVSELLHEYPKHLVCRSDSFYIGQKIPALSENDQLQLGHKYFLLPKHCFQ-SVLSFV 108

Query: 177 XXXXXXXXXXXXXXXXSPMATNNNTFVVNREIGSCQAFDIRKAPSGCLQVRVSDEFVSK 1
                           S     ++T  + ++  +C+AFDI+K+PSGCL++RVSDEF+S+
Sbjct: 109 TIASFVTTSQPQLPHSSTSTPRDSTNALLKKAATCRAFDIQKSPSGCLRIRVSDEFISQ 167


>gb|ABK21062.1| unknown [Picea sitchensis]
          Length = 193

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 48/119 (40%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
 Frame = -2

Query: 333 MLQFPKHLVCHSHSFYIGQKIQPLSPKDKLQLGHNYFLLPVHFFQXXXXXXXXXXXXXXX 154
           M  FP+HLVCHSHSFYIGQK   LSP  +L+LG+ YFLLP HFFQ               
Sbjct: 1   MQGFPQHLVCHSHSFYIGQKTSALSPNGQLKLGNRYFLLPDHFFQ--------SPLSLVS 52

Query: 153 XXXXXXXXSPMATNNNTFVVNREIGS-------CQAFDIRKAPSG-CLQVRVSDEFVSK 1
                    P+A +  T  V+  + S       CQ F+I  +  G  L++R+  EF+SK
Sbjct: 53  LSALISPPPPIAPSIPTARVSAPLRSFGRAAVLCQPFEILNSDGGRGLRIRIHPEFISK 111


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