BLASTX nr result

ID: Cimicifuga21_contig00030079 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030079
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]      132   3e-29
gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]       68   9e-10

>gb|AAM62133.1| phloem protein 2-2 [Apium graveolens Dulce Group]
          Length = 179

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/69 (91%), Positives = 65/69 (94%)
 Frame = -2

Query: 207 MAQVQRDDIVSLWTQGFQAVKDKSSCAAVLTAKELSIVWGSDCRYWKWVSKTGPINCEAL 28
           MAQVQRDDIVSLWTQGFQA+KDKSSCAAVLTAKELSIVWGSD RYWKWVSKT P+N EAL
Sbjct: 1   MAQVQRDDIVSLWTQGFQALKDKSSCAAVLTAKELSIVWGSDPRYWKWVSKTSPVNFEAL 60

Query: 27  DVAELIEVC 1
           D AELIEVC
Sbjct: 61  DAAELIEVC 69


>gb|AAM62132.1| phloem protein 2-1 [Apium graveolens Dulce Group]
          Length = 181

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/72 (48%), Positives = 50/72 (69%), Gaps = 3/72 (4%)
 Frame = -2

Query: 207 MAQVQRD-DIVSLWTQGFQAVKDK--SSCAAVLTAKELSIVWGSDCRYWKWVSKTGPINC 37
           MAQ+    +I++   +  + +K     SCAAVL+AKELSIVWGSD RYW   ++T P + 
Sbjct: 1   MAQLNSSHEIINSCARDLEGLKQNIAQSCAAVLSAKELSIVWGSDSRYWTTATETAPNSN 60

Query: 36  EALDVAELIEVC 1
           +++DV+ELIEVC
Sbjct: 61  QSVDVSELIEVC 72


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