BLASTX nr result

ID: Cimicifuga21_contig00030044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030044
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containin...   295   6e-78
emb|CBI27906.3| unnamed protein product [Vitis vinifera]              295   6e-78
ref|XP_003550631.1| PREDICTED: zinc finger CCCH domain-containin...   294   1e-77
ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|2...   293   1e-77
ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containin...   293   2e-77

>ref|XP_002279554.2| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Vitis vinifera]
          Length = 607

 Score =  295 bits (754), Expect = 6e-78
 Identities = 142/213 (66%), Positives = 166/213 (77%), Gaps = 5/213 (2%)
 Frame = -2

Query: 627 GTKGVYYAREPYSNHEAVHVTRFFGLAPVGNKDKEKFIHAISPTPASTMSSTEISMKPSN 448
           GTKG++Y REPYSN +AVHVTRF GLAPVGNKDK+KFIHAISP PASTMSS EISMKP N
Sbjct: 205 GTKGIFYDREPYSNLDAVHVTRFLGLAPVGNKDKQKFIHAISPIPASTMSSAEISMKPPN 264

Query: 447 TTLSPYTLREIS---KGAEKRPISSDSDAQYWRYDVSQKRQRQGNGNNEKPCFKFLSSGS 277
           TTL PY + E +     A KRP  S SD QYWRYDVSQKRQ+ G G+ +K CFKF+SSGS
Sbjct: 265 TTLFPYKIIEETAPTNQATKRPSDSISDTQYWRYDVSQKRQKHGAGDGDKLCFKFVSSGS 324

Query: 276 CLQGEKCNFQHDMNMREQFMRGVCFDFLTKGKCERGPDCSFEHSLVNISENVPHGRKISQ 97
           C +G KCNF HD   REQ+MRGVCFDF+ KGKCERGPDC+F+HSL +  E     R  S+
Sbjct: 325 CPRGNKCNFLHDTEAREQYMRGVCFDFINKGKCERGPDCNFKHSLQDEDEGFASRRSGSE 384

Query: 96  --KTVRSKGCWFCLSNSNVESHLILCVGENFYC 4
             K+ RSK CWFCLS+ +VESHLI+ +GE++YC
Sbjct: 385 NAKSSRSKRCWFCLSSPDVESHLIISIGESYYC 417


>emb|CBI27906.3| unnamed protein product [Vitis vinifera]
          Length = 593

 Score =  295 bits (754), Expect = 6e-78
 Identities = 142/213 (66%), Positives = 166/213 (77%), Gaps = 5/213 (2%)
 Frame = -2

Query: 627 GTKGVYYAREPYSNHEAVHVTRFFGLAPVGNKDKEKFIHAISPTPASTMSSTEISMKPSN 448
           GTKG++Y REPYSN +AVHVTRF GLAPVGNKDK+KFIHAISP PASTMSS EISMKP N
Sbjct: 191 GTKGIFYDREPYSNLDAVHVTRFLGLAPVGNKDKQKFIHAISPIPASTMSSAEISMKPPN 250

Query: 447 TTLSPYTLREIS---KGAEKRPISSDSDAQYWRYDVSQKRQRQGNGNNEKPCFKFLSSGS 277
           TTL PY + E +     A KRP  S SD QYWRYDVSQKRQ+ G G+ +K CFKF+SSGS
Sbjct: 251 TTLFPYKIIEETAPTNQATKRPSDSISDTQYWRYDVSQKRQKHGAGDGDKLCFKFVSSGS 310

Query: 276 CLQGEKCNFQHDMNMREQFMRGVCFDFLTKGKCERGPDCSFEHSLVNISENVPHGRKISQ 97
           C +G KCNF HD   REQ+MRGVCFDF+ KGKCERGPDC+F+HSL +  E     R  S+
Sbjct: 311 CPRGNKCNFLHDTEAREQYMRGVCFDFINKGKCERGPDCNFKHSLQDEDEGFASRRSGSE 370

Query: 96  --KTVRSKGCWFCLSNSNVESHLILCVGENFYC 4
             K+ RSK CWFCLS+ +VESHLI+ +GE++YC
Sbjct: 371 NAKSSRSKRCWFCLSSPDVESHLIISIGESYYC 403


>ref|XP_003550631.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Glycine max]
          Length = 552

 Score =  294 bits (752), Expect = 1e-77
 Identities = 143/210 (68%), Positives = 166/210 (79%), Gaps = 3/210 (1%)
 Frame = -2

Query: 627 GTKGVYYAREPYSNHEAVHVTRFFGLAPVGNKDKEKFIHAISPTPASTMSSTEISMKPSN 448
           GTKG+YYAREPYSN +AVHVTRF GLA VGN+DK+KFIHAISPTPASTMSSTEI+MK +N
Sbjct: 202 GTKGIYYAREPYSNVDAVHVTRFIGLASVGNRDKQKFIHAISPTPASTMSSTEIAMKTTN 261

Query: 447 TTLSPYTLREISKG---AEKRPISSDSDAQYWRYDVSQKRQRQGNGNNEKPCFKFLSSGS 277
           TTLSPYT +E       + KR   S SD QYWRYDV+QKRQ+   G+ +K CFKF+SSGS
Sbjct: 262 TTLSPYTFKEKRTSPMDSAKRSSDSISDPQYWRYDVAQKRQKHEAGHGDKLCFKFVSSGS 321

Query: 276 CLQGEKCNFQHDMNMREQFMRGVCFDFLTKGKCERGPDCSFEHSLVNISENVPHGRKISQ 97
           C +GEKCNFQHD + REQ MRGVCFDFL KGKCERGPDC+F+HSL +    +P  R  S 
Sbjct: 322 CPRGEKCNFQHDTDAREQCMRGVCFDFLNKGKCERGPDCNFKHSLQDEGNRLPSRRPGSG 381

Query: 96  KTVRSKGCWFCLSNSNVESHLILCVGENFY 7
              RSK CWFCLS+ NVESHLI+ +GEN+Y
Sbjct: 382 ---RSKECWFCLSSPNVESHLIISIGENYY 408


>ref|XP_002332828.1| predicted protein [Populus trichocarpa] gi|222833259|gb|EEE71736.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score =  293 bits (751), Expect = 1e-77
 Identities = 142/213 (66%), Positives = 167/213 (78%), Gaps = 5/213 (2%)
 Frame = -2

Query: 627 GTKGVYYAREPYSNHEAVHVTRFFGLAPVGNKDKEKFIHAISPTPASTMSSTEISMKPSN 448
           GTKGV+YAREPYSN +AVHVTRFFGLA VGNKDK+KFIHAISPTPASTMS+ EISMKP N
Sbjct: 200 GTKGVFYAREPYSNVDAVHVTRFFGLAMVGNKDKQKFIHAISPTPASTMSAAEISMKPPN 259

Query: 447 TTLSPYTL---REISKGAEKRPISSDSDAQYWRYDVSQKRQRQGNGNNEKPCFKFLSSGS 277
           TTLSPYTL   +   +   KR  +S SD+QYWRYDVS KR + G+G   K CFKF+ SGS
Sbjct: 260 TTLSPYTLVVDKTALEEVTKRSTASVSDSQYWRYDVSHKRHKSGSGEGNKLCFKFIYSGS 319

Query: 276 CLQGEKCNFQHDMNMREQFMRGVCFDFLTKGKCERGPDCSFEHSLVNISENVPHGRKISQ 97
           C +GEKCNFQHDM+ REQ++ GVC DFL KGKCERGPDC+F+H+L N  E+    R+ S+
Sbjct: 320 CPRGEKCNFQHDMDAREQYLGGVCLDFLIKGKCERGPDCNFKHNLQNEGESHSRRRRGSE 379

Query: 96  KT--VRSKGCWFCLSNSNVESHLILCVGENFYC 4
                RSK CWFCLS+ NVESHLI+ +GE +YC
Sbjct: 380 NDNGNRSKECWFCLSSPNVESHLIISIGEFYYC 412


>ref|XP_003542330.1| PREDICTED: zinc finger CCCH domain-containing protein 64-like
           [Glycine max]
          Length = 601

 Score =  293 bits (749), Expect = 2e-77
 Identities = 144/210 (68%), Positives = 165/210 (78%), Gaps = 3/210 (1%)
 Frame = -2

Query: 627 GTKGVYYAREPYSNHEAVHVTRFFGLAPVGNKDKEKFIHAISPTPASTMSSTEISMKPSN 448
           GTKG+YYAREPYSN +AVHVTRF GLA VGNKDK+KFIHAISPTPASTMSSTEI+MK +N
Sbjct: 204 GTKGIYYAREPYSNVDAVHVTRFIGLASVGNKDKQKFIHAISPTPASTMSSTEIAMKTTN 263

Query: 447 TTLSPYTLREISKG---AEKRPISSDSDAQYWRYDVSQKRQRQGNGNNEKPCFKFLSSGS 277
           TTLSPYT  E       + KR   S SD QYWRYDVSQKRQ+   G+ +K CFKF+SSGS
Sbjct: 264 TTLSPYTYEEKRTSPMDSTKRSSDSISDPQYWRYDVSQKRQKHEAGHGDKLCFKFVSSGS 323

Query: 276 CLQGEKCNFQHDMNMREQFMRGVCFDFLTKGKCERGPDCSFEHSLVNISENVPHGRKISQ 97
           C +GEKCNF+HD + REQ MRGVCFDFL KGKCERGPDC+F+HSL +    +P  R  S 
Sbjct: 324 CPRGEKCNFRHDTDAREQCMRGVCFDFLNKGKCERGPDCNFKHSLQDEGGRLPSRRPGSG 383

Query: 96  KTVRSKGCWFCLSNSNVESHLILCVGENFY 7
              RSK CWFCLS+ NVESHLI+ +GEN+Y
Sbjct: 384 ---RSKECWFCLSSPNVESHLIISIGENYY 410


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