BLASTX nr result

ID: Cimicifuga21_contig00030040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030040
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279617.1| PREDICTED: uncharacterized protein LOC100266...   167   2e-55
emb|CBI27911.3| unnamed protein product [Vitis vinifera]              167   2e-55
ref|XP_002309197.1| predicted protein [Populus trichocarpa] gi|2...   140   4e-45
ref|XP_002876547.1| hypothetical protein ARALYDRAFT_486503 [Arab...   127   6e-42
ref|XP_002514110.1| conserved hypothetical protein [Ricinus comm...   128   4e-41

>ref|XP_002279617.1| PREDICTED: uncharacterized protein LOC100266211 [Vitis vinifera]
          Length = 698

 Score =  167 bits (422), Expect(2) = 2e-55
 Identities = 85/180 (47%), Positives = 122/180 (67%), Gaps = 2/180 (1%)
 Frame = +3

Query: 144 NWDGYLIRGLASILELQIKLVSSLLDILAQPMQWSISMEVGSKLPFSDAYFPNDHQLVAV 323
           NW  +LI GLAS+L+L I++VS +LD++++P  W IS+E+GSKLPFS AYFP +H +  +
Sbjct: 260 NW--FLITGLASVLQLLIEVVSMILDVVSRPTGWGISVEMGSKLPFSIAYFPYNHHVYRI 317

Query: 324 LMGPISAESFLGLVHHIRGSAFPNEKNTHPILKENSTWAKTIDHKTTWATLMSFPEWFYF 503
           L G +S+ESFL LV  I         ++ P +K+      TI HK+ WA  M+FP+WF+F
Sbjct: 318 LSGTLSSESFLHLVSIINVPISRAGNHSMPTIKQVPMKISTIGHKSVWAAAMNFPDWFFF 377

Query: 504 AAVLLFSKKDCQPNFWAGCMPDTFKTEQTHDAEQYC--AAAARYLAYSISPMSKAYSDLL 677
           A+VLLFS+K  Q NF++ C     +TE+ HD E  C  +AAARY+A+ +SP  K++ DLL
Sbjct: 378 ASVLLFSEKSFQDNFYSKCGIGVPRTEKRHDVEPLCFSSAAARYIAWILSPADKSHQDLL 437



 Score = 75.1 bits (183), Expect(2) = 2e-55
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = +1

Query: 1   REFVERPLVNLKKELHDKMTWHSIIVCLALSPIKFIETRTLLHNWFLITGMA 156
           ++ ++RP + L KE H++M W SII+CL LSP  F+ETR LLHNWFLITG+A
Sbjct: 217 QDTMKRPFLCLNKEFHERMDWRSIIICLVLSPTMFVETRALLHNWFLITGLA 268


>emb|CBI27911.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  167 bits (422), Expect(2) = 2e-55
 Identities = 85/180 (47%), Positives = 122/180 (67%), Gaps = 2/180 (1%)
 Frame = +3

Query: 144 NWDGYLIRGLASILELQIKLVSSLLDILAQPMQWSISMEVGSKLPFSDAYFPNDHQLVAV 323
           NW  +LI GLAS+L+L I++VS +LD++++P  W IS+E+GSKLPFS AYFP +H +  +
Sbjct: 224 NW--FLITGLASVLQLLIEVVSMILDVVSRPTGWGISVEMGSKLPFSIAYFPYNHHVYRI 281

Query: 324 LMGPISAESFLGLVHHIRGSAFPNEKNTHPILKENSTWAKTIDHKTTWATLMSFPEWFYF 503
           L G +S+ESFL LV  I         ++ P +K+      TI HK+ WA  M+FP+WF+F
Sbjct: 282 LSGTLSSESFLHLVSIINVPISRAGNHSMPTIKQVPMKISTIGHKSVWAAAMNFPDWFFF 341

Query: 504 AAVLLFSKKDCQPNFWAGCMPDTFKTEQTHDAEQYC--AAAARYLAYSISPMSKAYSDLL 677
           A+VLLFS+K  Q NF++ C     +TE+ HD E  C  +AAARY+A+ +SP  K++ DLL
Sbjct: 342 ASVLLFSEKSFQDNFYSKCGIGVPRTEKRHDVEPLCFSSAAARYIAWILSPADKSHQDLL 401



 Score = 75.1 bits (183), Expect(2) = 2e-55
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = +1

Query: 1   REFVERPLVNLKKELHDKMTWHSIIVCLALSPIKFIETRTLLHNWFLITGMA 156
           ++ ++RP + L KE H++M W SII+CL LSP  F+ETR LLHNWFLITG+A
Sbjct: 181 QDTMKRPFLCLNKEFHERMDWRSIIICLVLSPTMFVETRALLHNWFLITGLA 232


>ref|XP_002309197.1| predicted protein [Populus trichocarpa] gi|222855173|gb|EEE92720.1|
           predicted protein [Populus trichocarpa]
          Length = 696

 Score =  140 bits (353), Expect(2) = 4e-45
 Identities = 75/177 (42%), Positives = 113/177 (63%), Gaps = 1/177 (0%)
 Frame = +3

Query: 150 DGYLIRGLASILELQIKLVSSLLDILAQPMQWSISMEVGSKLPFSDAYFPNDHQLVAVLM 329
           D +L  GL+S++EL ++LVS +LD++++P  W +S+E+G KLPFS++YFP     +  L 
Sbjct: 267 DWFLQTGLSSVVELLMELVSLILDVISRPTWWGLSLELGLKLPFSNSYFPYKSDFLRTLT 326

Query: 330 GPISAESFLGLVHHIRGSAFPNEKNTHPILKENSTWAKTIDHKTTWATLMSFPEWFYFAA 509
           GP S ESFL LVH  R SA+ + +   P +K ++    +IDHK+ WA  +SFP+WFYFA+
Sbjct: 327 GPFSYESFLQLVHMTRKSAYLHRELCDPAIKPSAVRVASIDHKSIWALAISFPDWFYFAS 386

Query: 510 VLLFS-KKDCQPNFWAGCMPDTFKTEQTHDAEQYCAAAARYLAYSISPMSKAYSDLL 677
           VLLFS  K+ Q N    C     +  Q   +    AAAA ++A+ +SP++K+  D L
Sbjct: 387 VLLFSDDKNSQQNIQVKCPLGVPEFGQLPAS----AAAATFIAWILSPVNKSNQDAL 439



 Score = 67.4 bits (163), Expect(2) = 4e-45
 Identities = 28/52 (53%), Positives = 40/52 (76%)
 Frame = +1

Query: 1   REFVERPLVNLKKELHDKMTWHSIIVCLALSPIKFIETRTLLHNWFLITGMA 156
           +E ++RP + L  E +++M W SI+VCL LSPI FI+TR LLH+WFL TG++
Sbjct: 224 QETIKRPFLCLSMEFYERMDWRSILVCLVLSPIMFIDTRALLHDWFLQTGLS 275


>ref|XP_002876547.1| hypothetical protein ARALYDRAFT_486503 [Arabidopsis lyrata subsp.
           lyrata] gi|297322385|gb|EFH52806.1| hypothetical protein
           ARALYDRAFT_486503 [Arabidopsis lyrata subsp. lyrata]
          Length = 685

 Score =  127 bits (319), Expect(2) = 6e-42
 Identities = 64/167 (38%), Positives = 97/167 (58%), Gaps = 1/167 (0%)
 Frame = +3

Query: 159 LIRGLASILELQIKLVSSLLDILAQPMQWSISMEVGSKLPFSDAYFPNDHQLVAVLMGPI 338
           L+ GLAS+ E+   LVS+++D +++P  W I ME+ S+LPFSD YFP+  Q + +L GP+
Sbjct: 261 LLTGLASVFEVLAGLVSAIMDTISKPSLWGIPMELASRLPFSDTYFPSQCQFLRILAGPL 320

Query: 339 SAESFLGLVHHI-RGSAFPNEKNTHPILKENSTWAKTIDHKTTWATLMSFPEWFYFAAVL 515
           S +S L L H + + SA P ++      K      + +D KT WA  ++FP+WFYFA+ +
Sbjct: 321 SFKSLLMLAHTVSKASAVPRQQQRDTNCKPTPIKVQALDDKTEWALAINFPDWFYFASAM 380

Query: 516 LFSKKDCQPNFWAGCMPDTFKTEQTHDAEQYCAAAARYLAYSISPMS 656
           LFS+ +   N    C        Q  D E    AAA Y+A+ ++P S
Sbjct: 381 LFSEGNSFENIQHRCTSKVADCRQACDVEDLSIAAATYIAWILNPGS 427



 Score = 69.7 bits (169), Expect(2) = 6e-42
 Identities = 28/52 (53%), Positives = 39/52 (75%)
 Frame = +1

Query: 1   REFVERPLVNLKKELHDKMTWHSIIVCLALSPIKFIETRTLLHNWFLITGMA 156
           ++ VERP +++KKEL ++  W  I++CLALSP  FI TR LLH W L+TG+A
Sbjct: 215 KDVVERPFLSIKKELFERAEWRDIVICLALSPTMFINTRALLHKWLLLTGLA 266


>ref|XP_002514110.1| conserved hypothetical protein [Ricinus communis]
           gi|223546566|gb|EEF48064.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 694

 Score =  128 bits (322), Expect(2) = 4e-41
 Identities = 71/180 (39%), Positives = 114/180 (63%), Gaps = 2/180 (1%)
 Frame = +3

Query: 144 NWDGYLIRGLASILELQIKLVSSLLDILAQPMQWSISMEVGSKLPFSDAYFPNDHQLVAV 323
           NW  +++ GL SILEL I+LV+ +LD++++P  W +SME+GSKLP+++AYFP  + L+ +
Sbjct: 257 NW--FMLTGLGSILELLIELVALILDVISRPTWWGMSMELGSKLPYANAYFPYKNHLLRI 314

Query: 324 LMGPISAESFLGLVHHIRGSAFPNEKNTHPILKENSTWAKTIDHKTTWATLMSFPEWFYF 503
           L+GP+S+ SFL LV+    S     +      K +     + + K+ WA  + FP+WFYF
Sbjct: 315 LVGPLSSISFLQLVYRTTESVSHIMEQFGRTCKASVLKIASTESKSIWALAICFPDWFYF 374

Query: 504 AAVLLFSKKDCQPNFWAGCMPDTFKTEQTHDAEQY--CAAAARYLAYSISPMSKAYSDLL 677
           A+VLLFS    Q +  +  +    K+ +T++ EQ    AAAARY+A+ +SP +++  D L
Sbjct: 375 ASVLLFSTNCFQKSHQSKRIFGVPKSGKTNNKEQSPPAAAAARYIAWILSPNNQSQQDWL 434



 Score = 65.9 bits (159), Expect(2) = 4e-41
 Identities = 26/48 (54%), Positives = 36/48 (75%)
 Frame = +1

Query: 10  VERPLVNLKKELHDKMTWHSIIVCLALSPIKFIETRTLLHNWFLITGM 153
           +ERP +   KE +D+M W SI++CL LSP  FI T+ LLHNWF++TG+
Sbjct: 217 MERPFLLSSKEFYDRMEWRSILMCLVLSPTMFIHTKALLHNWFMLTGL 264


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