BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030030
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat...    82   3e-14
ref|XP_002334555.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002525805.1| pentatricopeptide repeat-containing protein,...    81   8e-14
ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat...    80   2e-13
ref|XP_002305930.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13

>ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/77 (51%), Positives = 53/77 (68%)
 Frame = -3

Query: 233 LFHTMENNGLKANIVIYNIILHNMCKAGNIKEAKELFFNLSTKEVQPNTVTYTTMIKCFW 54
           LF  ME   L+ N+VIYNI+L  MC  G + +A+ELF  L +K ++ + V YTTMIK   
Sbjct: 444 LFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLC 503

Query: 53  KEGMLDDAQNLFTEMEE 3
           KEG+LDDA+NL  +MEE
Sbjct: 504 KEGLLDDAENLLMKMEE 520



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/71 (33%), Positives = 41/71 (57%)
 Frame = -3

Query: 233 LFHTMENNGLKANIVIYNIILHNMCKAGNIKEAKELFFNLSTKEVQPNTVTYTTMIKCFW 54
           LF  M + G++ ++V YN ++H +C  G  KEA  L  N+  K + PN  T+  ++  F 
Sbjct: 234 LFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFC 293

Query: 53  KEGMLDDAQNL 21
           K+GM+  A+ +
Sbjct: 294 KDGMISRAKTI 304


>ref|XP_002334555.1| predicted protein [Populus trichocarpa] gi|222873072|gb|EEF10203.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 38/77 (49%), Positives = 54/77 (70%)
 Frame = -3

Query: 233 LFHTMENNGLKANIVIYNIILHNMCKAGNIKEAKELFFNLSTKEVQPNTVTYTTMIKCFW 54
           LF  M+++ LK ++V+YNI++  MCK+GN+K+A+ELF  L  K +QPN   YTT+I    
Sbjct: 121 LFRAMQSSSLKPDLVMYNILVDAMCKSGNLKDARELFSELFVKGLQPNVQIYTTIINGLC 180

Query: 53  KEGMLDDAQNLFTEMEE 3
           KEG+LD+A   F  MEE
Sbjct: 181 KEGLLDEALEAFRNMEE 197



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/77 (36%), Positives = 45/77 (58%)
 Frame = -3

Query: 233 LFHTMENNGLKANIVIYNIILHNMCKAGNIKEAKELFFNLSTKEVQPNTVTYTTMIKCFW 54
           LF  M   G K ++  YNI+++  CKA  I +AK+L+  +  + + P+ VTY T+I    
Sbjct: 16  LFDVMITKGYKPDVFCYNILINGYCKATRIDKAKQLYNEMILQGLTPDKVTYNTLIHGLC 75

Query: 53  KEGMLDDAQNLFTEMEE 3
           + G L +AQ+LF  M +
Sbjct: 76  QLGRLREAQDLFKNMHK 92


>ref|XP_002525805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223534892|gb|EEF36579.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 182

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 39/77 (50%), Positives = 51/77 (66%)
 Frame = -3

Query: 233 LFHTMENNGLKANIVIYNIILHNMCKAGNIKEAKELFFNLSTKEVQPNTVTYTTMIKCFW 54
           LFH M+ N LK + V YNII+  MCKAG + +AKELF  L  + +QP+  TY  +IK F 
Sbjct: 47  LFHEMQKNTLKLDCVAYNIIVDGMCKAGKLNDAKELFSTLPIEGLQPDVRTYNILIKVFC 106

Query: 53  KEGMLDDAQNLFTEMEE 3
            EG L++A  +F EMEE
Sbjct: 107 NEGSLEEAYQVFREMEE 123


>ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/77 (51%), Positives = 51/77 (66%)
 Frame = -3

Query: 233 LFHTMENNGLKANIVIYNIILHNMCKAGNIKEAKELFFNLSTKEVQPNTVTYTTMIKCFW 54
           LF  ME   L+ NIV YNI+L  MC  G   +A+ELF  L +K +Q + V YTTMIK   
Sbjct: 380 LFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLC 439

Query: 53  KEGMLDDAQNLFTEMEE 3
           KEG+LDDA++L  +MEE
Sbjct: 440 KEGLLDDAEDLLMKMEE 456


>ref|XP_002305930.1| predicted protein [Populus trichocarpa] gi|222848894|gb|EEE86441.1|
           predicted protein [Populus trichocarpa]
          Length = 470

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 37/77 (48%), Positives = 53/77 (68%)
 Frame = -3

Query: 233 LFHTMENNGLKANIVIYNIILHNMCKAGNIKEAKELFFNLSTKEVQPNTVTYTTMIKCFW 54
           LF  M++  LK N+V+YNI+++ MCK+GN+K+A+ELF  L    +QPN   YTT+I    
Sbjct: 347 LFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLC 406

Query: 53  KEGMLDDAQNLFTEMEE 3
           KEG+LD+A   F  ME+
Sbjct: 407 KEGLLDEALEAFRNMED 423



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/76 (38%), Positives = 44/76 (57%)
 Frame = -3

Query: 233 LFHTMENNGLKANIVIYNIILHNMCKAGNIKEAKELFFNLSTKEVQPNTVTYTTMIKCFW 54
           LF+ M + G   N V YN ++H +C+ G ++EA++LF N+ T    PN  TY  ++  F 
Sbjct: 277 LFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFC 336

Query: 53  KEGMLDDAQNLFTEME 6
           K+G L  A  LF  M+
Sbjct: 337 KQGYLGKAFRLFRAMQ 352



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/75 (38%), Positives = 43/75 (57%)
 Frame = -3

Query: 233 LFHTMENNGLKANIVIYNIILHNMCKAGNIKEAKELFFNLSTKEVQPNTVTYTTMIKCFW 54
           LF  M   G K ++  Y+I+++  CKA  I EAK+LF  +  +   PN V+Y T+I    
Sbjct: 242 LFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLC 301

Query: 53  KEGMLDDAQNLFTEM 9
           + G L +AQ+LF  M
Sbjct: 302 QLGRLREAQDLFKNM 316



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/75 (36%), Positives = 40/75 (53%)
 Frame = -3

Query: 233 LFHTMENNGLKANIVIYNIILHNMCKAGNIKEAKELFFNLSTKEVQPNTVTYTTMIKCFW 54
           LF  M  NG   N+  Y I+L   CK G + +A  LF  + +  ++PN V Y  ++    
Sbjct: 312 LFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMC 371

Query: 53  KEGMLDDAQNLFTEM 9
           K G L DA+ LF+E+
Sbjct: 372 KSGNLKDARELFSEL 386