BLASTX nr result

ID: Cimicifuga21_contig00030021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030021
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002328132.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, put...    92   6e-17
ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR ...    87   1e-15
gb|ABO37118.1| cuticular water permeability [Solanum habrochaites]     87   1e-15

>ref|XP_002306979.1| predicted protein [Populus trichocarpa] gi|222856428|gb|EEE93975.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/80 (61%), Positives = 60/80 (75%), Gaps = 1/80 (1%)
 Frame = -3

Query: 237 NRPKGEHFV-QEVSPGIHVLSNAHLDTPWQKAQRLGQNFKEVLDKYDKGEEVPAKRLAEE 61
           NRP+GE  V QEVSPG+HVLSNA LD+PW K QRLG N K++L KY +  E+P K + E+
Sbjct: 124 NRPEGEPVVIQEVSPGLHVLSNAKLDSPWHKVQRLGLNLKDLLGKYGE-SEIPVKEVLEK 182

Query: 60  LMGDKSKGDKSRLPGIRPVE 1
           LM DK K DKSRLPGI  ++
Sbjct: 183 LMRDKVKADKSRLPGICSID 202


>ref|XP_002328132.1| predicted protein [Populus trichocarpa] gi|222837647|gb|EEE76012.1|
           predicted protein [Populus trichocarpa]
          Length = 262

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 49/80 (61%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
 Frame = -3

Query: 237 NRPKGEHF-VQEVSPGIHVLSNAHLDTPWQKAQRLGQNFKEVLDKYDKGEEVPAKRLAEE 61
           NRPK E+F V EV+PG+HVLSNA LD+PW KAQRLG  FK++L+KYD+  E+P K +AE 
Sbjct: 128 NRPKPENFIVMEVTPGMHVLSNASLDSPWPKAQRLGHGFKDLLEKYDEA-ELPTKEMAEI 186

Query: 60  LMGDKSKGDKSRLPGIRPVE 1
           LM +  K D+S LPGI P E
Sbjct: 187 LMTNTIKDDESMLPGIYPSE 206


>ref|XP_002510684.1| Ser/Thr-rich protein T10 in DGCR region, putative [Ricinus
           communis] gi|223551385|gb|EEF52871.1| Ser/Thr-rich
           protein T10 in DGCR region, putative [Ricinus communis]
          Length = 248

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/76 (61%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
 Frame = -3

Query: 237 NRPKGEHFV-QEVSPGIHVLSNAHLDTPWQKAQRLGQNFKEVLDKYDKGEEVPAKRLAEE 61
           NRPKGE  V QEVSPGIHVLSNA LD+PW K QRL  NFKE LD Y   +E+P + + E+
Sbjct: 107 NRPKGEPVVVQEVSPGIHVLSNAKLDSPWPKVQRLKLNFKEQLDTYGGEDEIPVEGMLEK 166

Query: 60  LMGDKSKGDKSRLPGI 13
           LM D  + +KS LPGI
Sbjct: 167 LMRDTVRAEKSGLPGI 182


>ref|XP_003631559.1| PREDICTED: ser/Thr-rich protein T10 in DGCR region-like [Vitis
           vinifera] gi|297744476|emb|CBI37738.3| unnamed protein
           product [Vitis vinifera]
          Length = 272

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 46/80 (57%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = -3

Query: 237 NRPKGEHF-VQEVSPGIHVLSNAHLDTPWQKAQRLGQNFKEVLDKYDKGEEVPAKRLAEE 61
           NRP+  +  V EVSPGIHVLSNA LD+PW KA+RLG NFKE+LDKY +G E+P + + E+
Sbjct: 128 NRPREANVSVVEVSPGIHVLSNASLDSPWPKARRLGHNFKELLDKYGEG-EIPTEEMVEK 186

Query: 60  LMGDKSKGDKSRLPGIRPVE 1
           LM +  K D+  LP I P E
Sbjct: 187 LMKNTIKDDEIVLPRIYPPE 206


>gb|ABO37118.1| cuticular water permeability [Solanum habrochaites]
          Length = 269

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/77 (58%), Positives = 57/77 (74%), Gaps = 2/77 (2%)
 Frame = -3

Query: 237 NRPKGEHF-VQEVSPGIHVLSNAHLDTPWQKAQRLGQNFKEVLDKYD-KGEEVPAKRLAE 64
           NRPKGE   +QEV PGIHVLSNA LD+PW KAQRL  NFK+++D Y+   E++  K + E
Sbjct: 127 NRPKGEPITIQEVQPGIHVLSNAKLDSPWPKAQRLKLNFKKMMDVYEVNDEKICVKDMIE 186

Query: 63  ELMGDKSKGDKSRLPGI 13
           +LM D +K DKS+LP I
Sbjct: 187 KLMRDTTKADKSKLPCI 203


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