BLASTX nr result

ID: Cimicifuga21_contig00030013 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00030013
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...   103   1e-20
ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...    88   8e-16
ref|XP_004137734.1| PREDICTED: UPF0503 protein At3g09070, chloro...    83   3e-14

>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
           vinifera]
          Length = 663

 Score =  103 bits (258), Expect = 1e-20
 Identities = 51/87 (58%), Positives = 59/87 (67%)
 Frame = +3

Query: 3   WPELRKEVDGKANVPFNRKDFXXXXXXXXXXXXXIDGLFGSTRSSSVETNGHGRKRRENI 182
           WPELR E +G     FNRK F             + G F STR SS E+NGHG+KRR+  
Sbjct: 550 WPELRGERNGDVRGAFNRKVFRSNSSVSSRNSFTMGGSFSSTRKSSAESNGHGKKRRDEF 609

Query: 183 VLERNRSARYSPSSVDNGLLRFYLTPL 263
           VLERNRSARYSP+++DNGLLRFYLTPL
Sbjct: 610 VLERNRSARYSPNNIDNGLLRFYLTPL 636


>ref|XP_002308207.1| predicted protein [Populus trichocarpa] gi|222854183|gb|EEE91730.1|
           predicted protein [Populus trichocarpa]
          Length = 686

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 49/88 (55%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   WPELRKEVDGKANVPFNRKDFXXXXXXXXXXXXXIDG-LFGSTRSSSVETNGHGRKRREN 179
           WPELR E +G     FN K                 G  F S R SSVETNG+GRK+R+ 
Sbjct: 572 WPELRGERNGDVRGGFNPKMLRSNSSVSWRNSHNFGGGSFSSARKSSVETNGNGRKKRDE 631

Query: 180 IVLERNRSARYSPSSVDNGLLRFYLTPL 263
            VLERNRSARYSP+++DNGLLRFYLTPL
Sbjct: 632 FVLERNRSARYSPNNMDNGLLRFYLTPL 659


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/89 (53%), Positives = 56/89 (62%), Gaps = 2/89 (2%)
 Frame = +3

Query: 3   WPELRKEVDGKANVPFNRKDFXXXXXXXXXXXXXIDG--LFGSTRSSSVETNGHGRKRRE 176
           WPELR E +G     FN K                 G   F S R SSVETNG+GRK+R+
Sbjct: 513 WPELRGERNGDVRGGFNPKILRSNSSVSWRNSHNFGGGGSFSSARKSSVETNGNGRKKRD 572

Query: 177 NIVLERNRSARYSPSSVDNGLLRFYLTPL 263
             VLERNRSARYSP++++NGLLRFYLTPL
Sbjct: 573 EFVLERNRSARYSPNNMENGLLRFYLTPL 601


>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
           gi|223525005|gb|EEF27813.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 676

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/87 (50%), Positives = 55/87 (63%)
 Frame = +3

Query: 3   WPELRKEVDGKANVPFNRKDFXXXXXXXXXXXXXIDGLFGSTRSSSVETNGHGRKRRENI 182
           WPELR E +    +  +                   G FGS R S+VETNGHGRK+++  
Sbjct: 567 WPELRGERNNNPKILRSNSSVSWRNSNGFGGG----GSFGSARKSNVETNGHGRKKKDEF 622

Query: 183 VLERNRSARYSPSSVDNGLLRFYLTPL 263
           VLERNRSARYSP+++DNGLLRFYLTP+
Sbjct: 623 VLERNRSARYSPNNIDNGLLRFYLTPM 649


>ref|XP_004137734.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus] gi|449533170|ref|XP_004173550.1| PREDICTED:
           UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 631

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 46/90 (51%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
 Frame = +3

Query: 3   WPELRKEVDGKANVP-FNRKDFXXXXXXXXXXXXXIDGLFGSTRSSSVETNGHGRKRREN 179
           WPELR + +G      FN K F             I G F S+R S+ E+NG+G+K++E 
Sbjct: 515 WPELRGDRNGDVKAGGFNPKMFRSNSSVSWRSASMIGGSFSSSRKSNAESNGNGKKKKEE 574

Query: 180 I--VLERNRSARYSPSSVDNGLLRFYLTPL 263
              VLERNRSAR SP++VDNGLLRFYLTPL
Sbjct: 575 AQPVLERNRSARQSPTNVDNGLLRFYLTPL 604