BLASTX nr result

ID: Cimicifuga21_contig00029996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029996
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16268.3| unnamed protein product [Vitis vinifera]              372   e-101
ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258...   372   e-101
gb|AFK76482.1| tRNA ligase [Solanum melongena]                        369   e-100
ref|XP_002323444.1| predicted protein [Populus trichocarpa] gi|2...   359   5e-97
ref|XP_003557437.1| PREDICTED: uncharacterized protein LOC100845...   355   1e-95

>emb|CBI16268.3| unnamed protein product [Vitis vinifera]
          Length = 1029

 Score =  372 bits (955), Expect = e-101
 Identities = 178/282 (63%), Positives = 228/282 (80%)
 Frame = +3

Query: 3    VLLMFYHLYNGKNRTKFECELAECFGTVVKMPLLKADRSPLPNPVKHVLEEGLNLYKLHL 182
            VLLMFYHLY GK+R +FE EL E FG++VKMPLLK+DRS +P+ VK+ LEEG+NLY+LH 
Sbjct: 748  VLLMFYHLYEGKSRKEFESELIERFGSLVKMPLLKSDRSTMPDSVKNCLEEGINLYRLHT 807

Query: 183  KKHGRLECMKGSYSREWVDWEKRLREVLFGNAKYLNAIQVPFDLAVKEVLEQLRAVAKGG 362
             +HGRLE  KG+Y+ EW  WEK+LR++LF NA+YL +IQVPF+ +V++VLEQL+++AKG 
Sbjct: 808  NRHGRLESTKGTYANEWSKWEKQLRDILFDNAEYLTSIQVPFESSVRQVLEQLKSIAKGD 867

Query: 363  SAAPTSGKRKFGTIGFAAVTLPVTEIKTLLEFLGQENPKVKAFLRGKDMHDYLKKAHITL 542
               P + KRKFGTI FAAV+LPVTEI++LL  L ++NPKV+AF + K + + L+ AH+TL
Sbjct: 868  YPTPGTEKRKFGTIVFAAVSLPVTEIQSLLANLAEKNPKVEAFFKDKHLENSLRNAHVTL 927

Query: 543  AHKKRHGVTAVASYGAYLNQNVPIDLTALLISDKTAALEARLGSIGDEKIISMNSWPHVT 722
            AHK+ HGVTAVA+YG +LN+ VP+D TALL SDK AALEA  GS+  E+I S N WPHVT
Sbjct: 928  AHKRSHGVTAVANYGLFLNRQVPVDFTALLFSDKMAALEAYPGSVDGERITSKNQWPHVT 987

Query: 723  VWNAAGVAAKEANTLPQLLSEGKATRIDINPATTISGTLDFY 848
            +W  AGVA KEAN LP+L+SEG ATRIDI+P  TISGTL+F+
Sbjct: 988  LWTGAGVAPKEANMLPELISEGTATRIDISPPITISGTLEFF 1029


>ref|XP_002284901.1| PREDICTED: uncharacterized protein LOC100258617 [Vitis vinifera]
          Length = 1165

 Score =  372 bits (955), Expect = e-101
 Identities = 178/282 (63%), Positives = 228/282 (80%)
 Frame = +3

Query: 3    VLLMFYHLYNGKNRTKFECELAECFGTVVKMPLLKADRSPLPNPVKHVLEEGLNLYKLHL 182
            VLLMFYHLY GK+R +FE EL E FG++VKMPLLK+DRS +P+ VK+ LEEG+NLY+LH 
Sbjct: 884  VLLMFYHLYEGKSRKEFESELIERFGSLVKMPLLKSDRSTMPDSVKNCLEEGINLYRLHT 943

Query: 183  KKHGRLECMKGSYSREWVDWEKRLREVLFGNAKYLNAIQVPFDLAVKEVLEQLRAVAKGG 362
             +HGRLE  KG+Y+ EW  WEK+LR++LF NA+YL +IQVPF+ +V++VLEQL+++AKG 
Sbjct: 944  NRHGRLESTKGTYANEWSKWEKQLRDILFDNAEYLTSIQVPFESSVRQVLEQLKSIAKGD 1003

Query: 363  SAAPTSGKRKFGTIGFAAVTLPVTEIKTLLEFLGQENPKVKAFLRGKDMHDYLKKAHITL 542
               P + KRKFGTI FAAV+LPVTEI++LL  L ++NPKV+AF + K + + L+ AH+TL
Sbjct: 1004 YPTPGTEKRKFGTIVFAAVSLPVTEIQSLLANLAEKNPKVEAFFKDKHLENSLRNAHVTL 1063

Query: 543  AHKKRHGVTAVASYGAYLNQNVPIDLTALLISDKTAALEARLGSIGDEKIISMNSWPHVT 722
            AHK+ HGVTAVA+YG +LN+ VP+D TALL SDK AALEA  GS+  E+I S N WPHVT
Sbjct: 1064 AHKRSHGVTAVANYGLFLNRQVPVDFTALLFSDKMAALEAYPGSVDGERITSKNQWPHVT 1123

Query: 723  VWNAAGVAAKEANTLPQLLSEGKATRIDINPATTISGTLDFY 848
            +W  AGVA KEAN LP+L+SEG ATRIDI+P  TISGTL+F+
Sbjct: 1124 LWTGAGVAPKEANMLPELISEGTATRIDISPPITISGTLEFF 1165


>gb|AFK76482.1| tRNA ligase [Solanum melongena]
          Length = 1167

 Score =  369 bits (946), Expect = e-100
 Identities = 177/282 (62%), Positives = 230/282 (81%)
 Frame = +3

Query: 3    VLLMFYHLYNGKNRTKFECELAECFGTVVKMPLLKADRSPLPNPVKHVLEEGLNLYKLHL 182
            V+LMFYHLY+GK+R +FE EL E FG++V++P+LK +RSPLP+ V+ ++EEGL+LY+LH 
Sbjct: 887  VMLMFYHLYDGKSRQEFESELIERFGSLVRIPVLKPERSPLPDSVRSIIEEGLSLYRLHT 946

Query: 183  KKHGRLECMKGSYSREWVDWEKRLREVLFGNAKYLNAIQVPFDLAVKEVLEQLRAVAKGG 362
             KHGRLE  KG+Y +EWV WEK+LR++L GNA YLN+IQVPF+ AVKEVLEQL+ +A+G 
Sbjct: 947  TKHGRLESTKGTYVQEWVKWEKQLRDILLGNADYLNSIQVPFEFAVKEVLEQLKVIARGE 1006

Query: 363  SAAPTSGKRKFGTIGFAAVTLPVTEIKTLLEFLGQENPKVKAFLRGKDMHDYLKKAHITL 542
             A P   KRK G+I FAA++LPV EI  LL  L +++PKV  F++ K M   ++KAH+TL
Sbjct: 1007 YAVPAE-KRKLGSIVFAAISLPVPEILGLLNDLAKKDPKVGDFIKDKSMESSIQKAHLTL 1065

Query: 543  AHKKRHGVTAVASYGAYLNQNVPIDLTALLISDKTAALEARLGSIGDEKIISMNSWPHVT 722
            AHK+ HGVTAVA+YG++L+Q VP+D+ ALL SDK AALEA  GS+  EKI S NSWPH+T
Sbjct: 1066 AHKRSHGVTAVANYGSFLHQKVPVDVAALLFSDKLAALEAEPGSVEGEKINSKNSWPHIT 1125

Query: 723  VWNAAGVAAKEANTLPQLLSEGKATRIDINPATTISGTLDFY 848
            +W+ AGVAAK+ANTLPQLLS+GKATRIDINP  TI+GTL+F+
Sbjct: 1126 LWSGAGVAAKDANTLPQLLSQGKATRIDINPPVTITGTLEFF 1167


>ref|XP_002323444.1| predicted protein [Populus trichocarpa] gi|222868074|gb|EEF05205.1|
            predicted protein [Populus trichocarpa]
          Length = 1152

 Score =  359 bits (922), Expect = 5e-97
 Identities = 182/293 (62%), Positives = 223/293 (76%), Gaps = 11/293 (3%)
 Frame = +3

Query: 3    VLLMFYHLYNGKNRTKFECELAECFGTVVKMPLLKADRSPLPNPVKHVLEEGLNLYKLHL 182
            VLLMFYHLY+GKNRT+FE EL E FG++VKMPLL+ DRS LP+PV+ +LEEG+NLY+LH 
Sbjct: 860  VLLMFYHLYDGKNRTEFESELIERFGSLVKMPLLRPDRSSLPDPVRLILEEGINLYRLHT 919

Query: 183  KKHGRLECMKGSYSREWVDWEKRLREVLFGNAKYLNAIQVPFDLAVKEVLEQLRAVAKGG 362
              HGRLE  KGSY +EWV WEK+LREVL G+A++LN+IQVPF+ AVK+V EQL+ + KG 
Sbjct: 920  NAHGRLESTKGSYGKEWVKWEKQLREVLIGSAEHLNSIQVPFESAVKQVSEQLQNIIKGE 979

Query: 363  SAAPTSGKRKFGTIGFAAVTLPVTEIKTLLE---------FLG--QENPKVKAFLRGKDM 509
               P++  RK GTI FAAV+LP TEI +LL+         FL     NPKVK+FL+ KDM
Sbjct: 980  YTPPSTEMRKLGTIIFAAVSLPATEISSLLDKASIMLCYYFLPSLSNNPKVKSFLKDKDM 1039

Query: 510  HDYLKKAHITLAHKKRHGVTAVASYGAYLNQNVPIDLTALLISDKTAALEARLGSIGDEK 689
               LKKAH+TLAHK+ HGVTAVA YG  L+Q VP++LTALL +D+ AALEA +GS+  EK
Sbjct: 1040 EHNLKKAHLTLAHKRSHGVTAVARYGHLLHQKVPVELTALLFTDEMAALEAEVGSVDGEK 1099

Query: 690  IISMNSWPHVTVWNAAGVAAKEANTLPQLLSEGKATRIDINPATTISGTLDFY 848
            +I  N WPHVT+W    +AAKEAN LPQLL EGKA RI+INP   ISG L+FY
Sbjct: 1100 VIPKNEWPHVTLWTGEKIAAKEANRLPQLLLEGKAIRIEINPPIIISGELEFY 1152


>ref|XP_003557437.1| PREDICTED: uncharacterized protein LOC100845723 [Brachypodium
            distachyon]
          Length = 1135

 Score =  355 bits (910), Expect = 1e-95
 Identities = 175/282 (62%), Positives = 213/282 (75%)
 Frame = +3

Query: 3    VLLMFYHLYNGKNRTKFECELAECFGTVVKMPLLKADRSPLPNPVKHVLEEGLNLYKLHL 182
            VLLMFY+LY+GK R  FE EL E FG++VKMPLLK DR+PLP  VK +L+EG++L++LH 
Sbjct: 854  VLLMFYNLYDGKRRRDFESELYERFGSLVKMPLLKPDRAPLPGDVKSILDEGISLFRLHQ 913

Query: 183  KKHGRLECMKGSYSREWVDWEKRLREVLFGNAKYLNAIQVPFDLAVKEVLEQLRAVAKGG 362
             +HGR E  KGSY++EW  WEKRLR VL GNA YL++IQVPFD+AVKEVLEQL+AVAKG 
Sbjct: 914  SRHGRAEPSKGSYAKEWAQWEKRLRGVLLGNADYLSSIQVPFDVAVKEVLEQLKAVAKGD 973

Query: 363  SAAPTSGKRKFGTIGFAAVTLPVTEIKTLLEFLGQENPKVKAFLRGKDMHDYLKKAHITL 542
               P + KR+FG I FAAVT+P  +I  LL  LG+ +  V  FL G  + D L KAH+TL
Sbjct: 974  IKTPDTAKRRFGNIVFAAVTVPQADILGLLRELGKNDSDVNTFLNGIKVEDNLSKAHVTL 1033

Query: 543  AHKKRHGVTAVASYGAYLNQNVPIDLTALLISDKTAALEARLGSIGDEKIISMNSWPHVT 722
            AHK+ HGV AVASYG Y NQ VP+   A L +DK AALEA+LG+I  EK+ S N WPHVT
Sbjct: 1034 AHKRAHGVAAVASYGVYQNQEVPVSFNAFLYTDKMAALEAQLGTINGEKVNSRNDWPHVT 1093

Query: 723  VWNAAGVAAKEANTLPQLLSEGKATRIDINPATTISGTLDFY 848
            +W A GVAAKEANTLP+L+S G+A R+ I+P  TISG LDFY
Sbjct: 1094 LWTAPGVAAKEANTLPELVSAGQAKRVPIDPPITISGVLDFY 1135


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