BLASTX nr result

ID: Cimicifuga21_contig00029995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029995
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523633.1| Myosin-9, putative [Ricinus communis] gi|223...    67   2e-09
ref|XP_002282435.1| PREDICTED: filament-like plant protein 7-lik...    67   2e-09
emb|CAN79543.1| hypothetical protein VITISV_025322 [Vitis vinifera]    67   2e-09
ref|XP_002307274.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
emb|CBI32383.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002523633.1| Myosin-9, putative [Ricinus communis] gi|223537195|gb|EEF38828.1|
            Myosin-9, putative [Ricinus communis]
          Length = 1132

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
 Frame = -1

Query: 406  QLKALSSPKETALLDKIVSISPT------------TATKSKSANHRCSLLDQMLSEDNAN 263
            QLKAL++P E +L DK++S SP             +A ++K  N R SL DQML+EDNA 
Sbjct: 990  QLKALAAPSEASLFDKVISSSPDRNGDSISTNTTLSAPRNKLMNQRSSLRDQMLAEDNAK 1049

Query: 262  IEEFISPKKKETICVMADPLKSVAHPSHIPSMAFDLESQVKSQEKLLCSSETKYKAKAVA 83
             +   SP+ KE+                  ++ F  + +V+  EK+L  +ETK +   VA
Sbjct: 1050 TKSGGSPQTKES-----------------DNVGFVSDGKVEPLEKILILNETKVQDDNVA 1092

Query: 82   EQAVAIVNSRRCGG 41
             +++AIV  ++ GG
Sbjct: 1093 IRSLAIVPRKKRGG 1106


>ref|XP_002282435.1| PREDICTED: filament-like plant protein 7-like [Vitis vinifera]
          Length = 1098

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 50/127 (39%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
 Frame = -1

Query: 406  QLKALSSPKETALLDKIVSISPTTATKSKSANHRCSLLDQMLSEDNANIEEFISPKKKET 227
            QLKAL+SP++ A+ DK+ S + +TAT  K  +HR SL D+ML++D+A+ E F SPK KE 
Sbjct: 959  QLKALASPRDRAIFDKVYSTT-STATNDKKLSHRSSLRDRMLADDDADTEVFKSPKIKEI 1017

Query: 226  ICVMADPLKSVAH-PSHI---PSMAFDL-ESQVKSQEKLLCSSETKYKAKAVAEQAVAIV 62
            I        S AH PS +    S +FD  +  V++ +      ++K++A   A  ++AIV
Sbjct: 1018 I--------STAHIPSTLGSNNSNSFDAPDIHVEAPD---AYHDSKHRAVTPAVGSLAIV 1066

Query: 61   NSRRCGG 41
             S++ GG
Sbjct: 1067 PSKKKGG 1073


>emb|CAN79543.1| hypothetical protein VITISV_025322 [Vitis vinifera]
          Length = 999

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 50/127 (39%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
 Frame = -1

Query: 406  QLKALSSPKETALLDKIVSISPTTATKSKSANHRCSLLDQMLSEDNANIEEFISPKKKET 227
            QLKAL+SP++ A+ DK+ S + +TAT  K  +HR SL D+ML++D+A+ E F SPK KE 
Sbjct: 860  QLKALASPRDRAIFDKVYSTT-STATNDKKLSHRSSLRDRMLADDDADTEVFKSPKIKEI 918

Query: 226  ICVMADPLKSVAH-PSHI---PSMAFDL-ESQVKSQEKLLCSSETKYKAKAVAEQAVAIV 62
            I        S AH PS +    S +FD  +  V++ +      ++K++A   A  ++AIV
Sbjct: 919  I--------STAHIPSTLGSNNSNSFDAPDIHVEAPD---AYHDSKHRAVTPAVGSLAIV 967

Query: 61   NSRRCGG 41
             S++ GG
Sbjct: 968  PSKKKGG 974


>ref|XP_002307274.1| predicted protein [Populus trichocarpa] gi|222856723|gb|EEE94270.1|
            predicted protein [Populus trichocarpa]
          Length = 947

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 13/137 (9%)
 Frame = -1

Query: 406  QLKALSSPKETALLDKIVS-------ISPTTAT------KSKSANHRCSLLDQMLSEDNA 266
            QLKAL+SP E AL DK++S       IS TT+T      K+K    R SLLDQML+ED  
Sbjct: 802  QLKALASPSEAALFDKVISTSTDTNTISVTTSTSTALTPKNKVLIQRSSLLDQMLAEDTD 861

Query: 265  NIEEFISPKKKETICVMADPLKSVAHPSHIPSMAFDLESQVKSQEKLLCSSETKYKAKAV 86
             +++  S K KE+    +  + S                 ++  EK+L  +  K++   +
Sbjct: 862  KVKDTKSVKCKESDSNTSSTVIS--------------NKVIEPLEKILVLNGIKHQDDGI 907

Query: 85   AEQAVAIVNSRRCGGVS 35
            A  ++AIV S++ GGV+
Sbjct: 908  ATNSLAIVPSKKRGGVN 924


>emb|CBI32383.3| unnamed protein product [Vitis vinifera]
          Length = 632

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/56 (50%), Positives = 42/56 (75%)
 Frame = -1

Query: 406 QLKALSSPKETALLDKIVSISPTTATKSKSANHRCSLLDQMLSEDNANIEEFISPK 239
           QLKAL+SP++ A+ DK+ S + +TAT  K  +HR SL D+ML++D+A+ E F SP+
Sbjct: 575 QLKALASPRDRAIFDKVYSTT-STATNDKKLSHRSSLRDRMLADDDADTEVFKSPR 629


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