BLASTX nr result

ID: Cimicifuga21_contig00029981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029981
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454609.1| hypothetical protein SORBIDRAFT_04g034250 [S...    75   4e-12
ref|XP_002301000.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
dbj|BAK00903.1| predicted protein [Hordeum vulgare subsp. vulgare]     74   2e-11
ref|NP_001238617.1| receptor-like protein kinase like protein [G...    74   2e-11
ref|XP_002513778.1| s-receptor kinase, putative [Ricinus communi...    73   3e-11

>ref|XP_002454609.1| hypothetical protein SORBIDRAFT_04g034250 [Sorghum bicolor]
           gi|241934440|gb|EES07585.1| hypothetical protein
           SORBIDRAFT_04g034250 [Sorghum bicolor]
          Length = 884

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 49/135 (36%), Positives = 67/135 (49%), Gaps = 19/135 (14%)
 Frame = -1

Query: 358 SDSNFSYGDYQLLVTDKDAILLWNGHKYWTLSSTTSA------NNSYMRINQSGLY-ISS 200
           SDS+FS GDYQL VT  D +L W G  YW LS+  S+        +YM +N +GLY +++
Sbjct: 176 SDSDFSEGDYQLNVTAADVLLTWMGSMYWRLSNDASSTVDRGGTVAYMAVNGTGLYLLAA 235

Query: 199 DGDQMIK------PVRFITLHYWGHLNFFSFSDKE------EPYHVEPTRDCLLPFRCGR 56
           DG  +++       +R + L Y G L   SF+         +   V P   C LP  CG 
Sbjct: 236 DGGVLVQVSFPAAELRIVRLGYDGKLQIVSFASANSSKSPMDGGFVAPRDACALPLFCGA 295

Query: 55  LGLCVETNPVSVCSC 11
           LGLC        C+C
Sbjct: 296 LGLCTPKG----CTC 306


>ref|XP_002301000.1| predicted protein [Populus trichocarpa] gi|222842726|gb|EEE80273.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 17/136 (12%)
 Frame = -1

Query: 358 SDSNFSYGDYQLLVTDKDAILLWNGHKYWTLSSTTSAN------NSYMRINQSGLYI-SS 200
           SD + S GDY+L V+D D +L W G  YW LS    A       N YM IN +GL++   
Sbjct: 171 SDDDLSTGDYKLTVSDSDVLLQWYGQTYWKLSMDARAYRNSNYINEYMEINGTGLFLFGR 230

Query: 199 DGDQMIKPV-------RFITLHYWGHLNFFSF--SDKEEPYHVEPTRDCLLPFRCGRLGL 47
           +G  ++  V       R   L   G     SF  +D+++ + V P   C +PF CGR+GL
Sbjct: 231 NGSAVVTQVTLPPSKFRIAQLDASGQFMISSFLGTDRKQEF-VGPIDGCRIPFVCGRIGL 289

Query: 46  CV-ETNPVSVCSCSVG 2
           C   T+   +CSC  G
Sbjct: 290 CTGTTSNGPICSCPQG 305


>dbj|BAK00903.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 895

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 45/135 (33%), Positives = 62/135 (45%), Gaps = 19/135 (14%)
 Frame = -1

Query: 358 SDSNFSYGDYQLLVTDKDAILLWNGHKYWTLSSTTSANN------SYMRINQSGLYISSD 197
           S S+ + GDY+L VT  DA+L W G  YW LS    A        +YM +N +G+Y+ + 
Sbjct: 180 SASDLAEGDYRLNVTAADAVLAWMGSLYWRLSGEAIAVKDRDGTVAYMAVNGTGIYLLAA 239

Query: 196 GDQMIKP-------VRFITLHYWGHLNFFSFSDKEEPYH------VEPTRDCLLPFRCGR 56
            D ++         +R + L   G L   SF+             V P+R C LP  CG 
Sbjct: 240 DDTVVVQAAMPPAGLRIVQLGVDGKLQISSFASANSSSSPMDGGIVAPSRGCALPLSCGA 299

Query: 55  LGLCVETNPVSVCSC 11
           LGLC      S C+C
Sbjct: 300 LGLCTPNGNASTCTC 314


>ref|NP_001238617.1| receptor-like protein kinase like protein [Glycine max]
           gi|223452339|gb|ACM89497.1| receptor-like protein kinase
           like protein [Glycine max]
          Length = 771

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 50/133 (37%), Positives = 69/133 (51%), Gaps = 17/133 (12%)
 Frame = -1

Query: 358 SDSNFSYGDYQLLVTDKDAILLWNGHKYWTLSSTT----SANN--SYMRINQSGLYISSD 197
           S+S+ S G+Y+L +T  DA+L W G  YW LS+ T    ++N+   YM IN +G Y+  D
Sbjct: 77  SNSDLSKGNYKLTITSSDAVLQWYGQTYWKLSTDTRVYKNSNDMLEYMAINNTGFYLFGD 136

Query: 196 GD---QMIKPVRFITLHYWGH-----LNFFSFSDKEEPYHVEPTRDCLLPFRCGRLGLCV 41
           G    Q+  P+    +   G      +N FS ++  +   V P   C  P  CGR GLC 
Sbjct: 137 GGTVFQLGLPLANFRIAKLGTSGQFIVNSFSGTNNLKQEFVGPEDGCQTPLACGRAGLCT 196

Query: 40  ETNPVS---VCSC 11
           E N VS   VCSC
Sbjct: 197 E-NTVSSSPVCSC 208


>ref|XP_002513778.1| s-receptor kinase, putative [Ricinus communis]
           gi|223546864|gb|EEF48361.1| s-receptor kinase, putative
           [Ricinus communis]
          Length = 793

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 49/136 (36%), Positives = 72/136 (52%), Gaps = 17/136 (12%)
 Frame = -1

Query: 358 SDSNFSYGDYQLLVTDKDAILLWNGHKYWTLSSTTSA--NNSY----MRINQSGLYI--- 206
           S +N S G Y+L ++D DAIL W G  YW LS    A  N++Y    M IN++GL++   
Sbjct: 100 SSNNLSTGHYRLAISDSDAILQWQGQTYWKLSMDAGAYTNSNYIVDFMAINRTGLFLFGL 159

Query: 205 --SSDGDQM-IKPVRFITLHYWGHLNF----FSFSDKEEPYHVEPTRDCLLPFRCGRLGL 47
             S+   QM + P  F          F    FS S+K++ + V P   C +P  CG++GL
Sbjct: 160 NGSAIVIQMSLSPSNFRVAQLGASGQFTISSFSGSNKQQEF-VGPMDGCQIPLACGKIGL 218

Query: 46  CVE-TNPVSVCSCSVG 2
           C++ T+    CSC +G
Sbjct: 219 CIDTTSSRPTCSCPLG 234


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