BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029956
         (979 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vu...    93   9e-17
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]               87   5e-15
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]               87   5e-15
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]               87   5e-15
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]               87   6e-15

>gb|AER13159.1| putative Ty-1 copia retrotransposon [Phaseolus vulgaris]
          Length = 867

 Score = 93.2 bits (230), Expect = 9e-17
 Identities = 48/99 (48%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
 Frame = +1

Query: 457 HHMCPHRDWFASFKELDDDCVLLGNGHTYKTRGVGTIRLKLEDGTIRSLED---VSELNV 627
           +HMCP RDWF  F+ELD   V +GN +  KT G+G+I+L+  DG+ R L D   V +L  
Sbjct: 233 YHMCPIRDWFFEFQELDGGVVYMGNDNPCKTVGIGSIKLRNHDGSTRILRDVRYVPKLKK 292

Query: 628 NLISFRALESDGLKIILEHGALKVVSGARVVMKGTRRQN 744
           NLIS  ALES GL + +  G LK  SGA V++KG  + N
Sbjct: 293 NLISLGALESKGLVVTMRDGILKATSGALVMLKGVMKNN 331


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = +1

Query: 460 HMCPHRDWFASFKELDDDCVLLGNGHTYKTRGVGTIRLKLEDGTIRSLEDVSE---LNVN 630
           HM PHRDWF S++ + +  V +GN H  +  GVGTIRLK+ DGT+R ++ V     L  N
Sbjct: 300 HMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKN 359

Query: 631 LISFRALESDGLKIILEHGALKVVSGARVVMKGTR 735
           L+S   L+  G KI  E G LKVV G  VVMK  +
Sbjct: 360 LLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEK 394


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = +1

Query: 460 HMCPHRDWFASFKELDDDCVLLGNGHTYKTRGVGTIRLKLEDGTIRSLEDVSE---LNVN 630
           HM PHRDWF S++ + +  V +GN H  +  GVGTIRLK+ DGT+R ++ V     L  N
Sbjct: 300 HMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKN 359

Query: 631 LISFRALESDGLKIILEHGALKVVSGARVVMKGTR 735
           L+S   L+  G KI  E G LKVV G  VVMK  +
Sbjct: 360 LLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEK 394


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 87.4 bits (215), Expect = 5e-15
 Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = +1

Query: 460 HMCPHRDWFASFKELDDDCVLLGNGHTYKTRGVGTIRLKLEDGTIRSLEDVSE---LNVN 630
           HM PHRDWF S++ + +  V +GN H  +  GVGTIRLK+ DGT+R ++ V     L  N
Sbjct: 300 HMTPHRDWFFSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKN 359

Query: 631 LISFRALESDGLKIILEHGALKVVSGARVVMKGTR 735
           L+S   L+  G KI  E G LKVV G  VVMK  +
Sbjct: 360 LLSVGQLDDLGCKIHTESGILKVVKGNLVVMKAEK 394


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
 Frame = +1

Query: 460 HMCPHRDWFASFKELDDDCVLLGNGHTYKTRGVGTIRLKLEDGTIRSLEDVSE---LNVN 630
           HM PHRDWF S++ + +  V +GN H  +  GVGTIRLK+ DGT+R ++ V     L  N
Sbjct: 300 HMTPHRDWFYSYEPISEGSVYMGNDHALEIAGVGTIRLKMHDGTVRKIQGVRHVKGLKKN 359

Query: 631 LISFRALESDGLKIILEHGALKVVSGARVVMKGTR 735
           L+S   L+  G KI  E G LKVV G  VVMK  +
Sbjct: 360 LLSVGQLDDLGCKIHSESGILKVVKGNLVVMKAEK 394