BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029946
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332094.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g...   143   2e-32
ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus ...   140   8e-32
ref|XP_002330818.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arab...   137   1e-30

>ref|XP_002332094.1| predicted protein [Populus trichocarpa] gi|222874914|gb|EEF12045.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  143 bits (360), Expect = 2e-32
 Identities = 76/126 (60%), Positives = 87/126 (69%), Gaps = 4/126 (3%)
 Frame = +2

Query: 5   KWPGWPGDNVFRLIVSAEKFGGNIGQKGERIKKMCEESRARIRILEDSLSTADRIVLIFG 184
           KWPGWPGDNVFRLIV   K G  IG+KGE +KKMC+E+RARIRILE  L   DRIVLI G
Sbjct: 45  KWPGWPGDNVFRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISG 104

Query: 185 KEEPDAHISPAMNAVLRVFKHINGL----XXXXXXXXXXXXXXXXXCSVGLLVPSSQASD 352
           KEEP+A +SPAM+AVLRVFK ++GL                     CS+ LLV SSQA +
Sbjct: 105 KEEPEAPLSPAMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAIN 164

Query: 353 LIGKQG 370
           LIGKQG
Sbjct: 165 LIGKQG 170


>ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
           vinifera]
          Length = 466

 Score =  143 bits (360), Expect = 2e-32
 Identities = 72/122 (59%), Positives = 88/122 (72%)
 Frame = +2

Query: 5   KWPGWPGDNVFRLIVSAEKFGGNIGQKGERIKKMCEESRARIRILEDSLSTADRIVLIFG 184
           KWPGWPGD VFRLIV   K G  IG+KGE IKKMCEE+RARIR+L+ ++ T+DRIVLI G
Sbjct: 70  KWPGWPGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISG 129

Query: 185 KEEPDAHISPAMNAVLRVFKHINGLXXXXXXXXXXXXXXXXXCSVGLLVPSSQASDLIGK 364
           +EEP+A +SPAM+AV+RVFK + GL                 CS+ LLV S+QA +LIGK
Sbjct: 130 REEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGK 189

Query: 365 QG 370
           QG
Sbjct: 190 QG 191


>ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 416

 Score =  140 bits (354), Expect = 8e-32
 Identities = 75/122 (61%), Positives = 86/122 (70%)
 Frame = +2

Query: 5   KWPGWPGDNVFRLIVSAEKFGGNIGQKGERIKKMCEESRARIRILEDSLSTADRIVLIFG 184
           KWPGWPGDNV+RLIV   K G  IG+KGE IKKMC E+RARIRIL+   S +DRIVLI G
Sbjct: 19  KWPGWPGDNVYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISG 78

Query: 185 KEEPDAHISPAMNAVLRVFKHINGLXXXXXXXXXXXXXXXXXCSVGLLVPSSQASDLIGK 364
           KEEP+A +SPAM+AVLRVFK ++GL                  SV LLV SSQA +LIGK
Sbjct: 79  KEEPEAALSPAMDAVLRVFKRVSGLSAGEADAMGSAVAGAAFSSVKLLVASSQAINLIGK 138

Query: 365 QG 370
           QG
Sbjct: 139 QG 140


>ref|XP_002330818.1| predicted protein [Populus trichocarpa] gi|222872620|gb|EEF09751.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score =  140 bits (352), Expect = 1e-31
 Identities = 74/124 (59%), Positives = 87/124 (70%), Gaps = 2/124 (1%)
 Frame = +2

Query: 5   KWPGWPGDNVFRLIVSAEKFGGNIGQKGERIKKMCEESRARIRILEDSLSTADRIVLIFG 184
           KWPGWPGDNVFRLIV   K G  IG++GE +KKMC+E+RARIRILE  L  +DRIVLI G
Sbjct: 3   KWPGWPGDNVFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISG 62

Query: 185 KEEPDAHISPAMNAVLRVFKHINGL--XXXXXXXXXXXXXXXXXCSVGLLVPSSQASDLI 358
           KEEP+A  SPAM+AV+RVFK ++GL                   CS+ LLV SSQA +LI
Sbjct: 63  KEEPEAPQSPAMDAVMRVFKRVSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAINLI 122

Query: 359 GKQG 370
           GKQG
Sbjct: 123 GKQG 126


>ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
           lyrata] gi|297315471|gb|EFH45894.1| hypothetical protein
           ARALYDRAFT_492216 [Arabidopsis lyrata subsp. lyrata]
          Length = 495

 Score =  137 bits (344), Expect = 1e-30
 Identities = 70/122 (57%), Positives = 89/122 (72%)
 Frame = +2

Query: 5   KWPGWPGDNVFRLIVSAEKFGGNIGQKGERIKKMCEESRARIRILEDSLSTADRIVLIFG 184
           +WPGWPGD VFR+IV   K G  IG+KG+ IKKMCEE+RARI++L+  ++T DRIVLI G
Sbjct: 66  RWPGWPGDCVFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISG 125

Query: 185 KEEPDAHISPAMNAVLRVFKHINGLXXXXXXXXXXXXXXXXXCSVGLLVPSSQASDLIGK 364
           KEEP+A++SPAM+AVLRVF+ ++GL                 CSV LLV S+QA +LIGK
Sbjct: 126 KEEPEAYMSPAMDAVLRVFRRVSGL--PDNDDDDVQNAGSAFCSVRLLVASTQAINLIGK 183

Query: 365 QG 370
           QG
Sbjct: 184 QG 185