BLASTX nr result

ID: Cimicifuga21_contig00029936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029936
         (194 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531674.1| ATP-binding cassette transporter, putative [...   114   1e-23
dbj|BAL46500.1| ABC transporter [Diospyros kaki]                      112   2e-23
ref|XP_002336087.1| white-brown-complex ABC transporter family [...   112   2e-23
ref|XP_002306299.1| white-brown-complex ABC transporter family [...   112   2e-23
ref|XP_002269388.2| PREDICTED: ABC transporter G family member 1...   112   4e-23

>ref|XP_002531674.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223528705|gb|EEF30718.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 712

 Score =  114 bits (284), Expect = 1e-23
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = -3

Query: 192 GGQKRRVSICIEILTRLKLLFLDEPTSGLDSAASYHVMKRIVGIARQDGRTVVASIHQPS 13
           GGQKRRVSICIEILTR KLLFLDEPTSGLDSAASYHVM RIV +A+QD RTVVASIHQPS
Sbjct: 249 GGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYHVMNRIVKLAKQDQRTVVASIHQPS 308

Query: 12  SEVF 1
           SEVF
Sbjct: 309 SEVF 312


>dbj|BAL46500.1| ABC transporter [Diospyros kaki]
          Length = 738

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/64 (87%), Positives = 60/64 (93%)
 Frame = -3

Query: 192 GGQKRRVSICIEILTRLKLLFLDEPTSGLDSAASYHVMKRIVGIARQDGRTVVASIHQPS 13
           GGQKRRVSICIEILTR KLLFLDEPTSGLDSAASYHVM RI+ +A+QD RTV+ASIHQPS
Sbjct: 272 GGQKRRVSICIEILTRPKLLFLDEPTSGLDSAASYHVMNRIIKLAQQDRRTVIASIHQPS 331

Query: 12  SEVF 1
           SEVF
Sbjct: 332 SEVF 335


>ref|XP_002336087.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222871834|gb|EEF08965.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 616

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/64 (87%), Positives = 60/64 (93%)
 Frame = -3

Query: 192 GGQKRRVSICIEILTRLKLLFLDEPTSGLDSAASYHVMKRIVGIARQDGRTVVASIHQPS 13
           GGQKRRVSICIEILT+ KLLFLDEPTSGLDSAASYHVM  IV +ARQ+GRT+VASIHQPS
Sbjct: 146 GGQKRRVSICIEILTQPKLLFLDEPTSGLDSAASYHVMNHIVKLARQEGRTIVASIHQPS 205

Query: 12  SEVF 1
           SEVF
Sbjct: 206 SEVF 209


>ref|XP_002306299.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222855748|gb|EEE93295.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 611

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/64 (87%), Positives = 60/64 (93%)
 Frame = -3

Query: 192 GGQKRRVSICIEILTRLKLLFLDEPTSGLDSAASYHVMKRIVGIARQDGRTVVASIHQPS 13
           GGQKRRVSICIEILT+ KLLFLDEPTSGLDSAASYHVM  IV +ARQ+GRT+VASIHQPS
Sbjct: 146 GGQKRRVSICIEILTQPKLLFLDEPTSGLDSAASYHVMNHIVKLARQEGRTIVASIHQPS 205

Query: 12  SEVF 1
           SEVF
Sbjct: 206 SEVF 209


>ref|XP_002269388.2| PREDICTED: ABC transporter G family member 11-like [Vitis vinifera]
          Length = 741

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/64 (89%), Positives = 59/64 (92%)
 Frame = -3

Query: 192 GGQKRRVSICIEILTRLKLLFLDEPTSGLDSAASYHVMKRIVGIARQDGRTVVASIHQPS 13
           GGQKRRVSICIEILTR +LLFLDEPTSGLDSAASYHVM RIV +AR DG TVVASIHQPS
Sbjct: 259 GGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYHVMSRIVKLARHDGITVVASIHQPS 318

Query: 12  SEVF 1
           SEVF
Sbjct: 319 SEVF 322


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