BLASTX nr result

ID: Cimicifuga21_contig00029904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029904
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40738.3| unnamed protein product [Vitis vinifera]              201   7e-50
ref|XP_002273276.1| PREDICTED: F-box/kelch-repeat protein At5g42...   201   7e-50
ref|XP_002510700.1| hypothetical protein RCOM_1601660 [Ricinus c...   196   2e-48
ref|XP_002307801.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-46
ref|XP_002300636.1| predicted protein [Populus trichocarpa] gi|2...   187   6e-46

>emb|CBI40738.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  201 bits (510), Expect = 7e-50
 Identities = 92/121 (76%), Positives = 103/121 (85%)
 Frame = +3

Query: 3   LISCNGRLLMLSVSWCEQDGQSSWREKAVRKLWELDLMHFTWSEISRHPDAPMDWNAAFV 182
           L+SCNGRL MLSVSWCE DGQ   R KAVRKLWELDLM+ TW+E+S HPDAPMDWNAAFV
Sbjct: 285 LVSCNGRLFMLSVSWCEGDGQIGRRNKAVRKLWELDLMYLTWTEVSIHPDAPMDWNAAFV 344

Query: 183 EDRGRIFGIEMFKIFGQVLDFLTVCNTSDLTLEWSRVSRKHVAHELDSSSCITKSLAVLH 362
            DR  IFG+EMFKIFGQVLDFLTVC+ SD    WS +SR HVAHELD+SSC+TKS+AVLH
Sbjct: 345 ADRNLIFGVEMFKIFGQVLDFLTVCDVSDKGTNWSHISRNHVAHELDASSCMTKSMAVLH 404

Query: 363 M 365
           +
Sbjct: 405 L 405


>ref|XP_002273276.1| PREDICTED: F-box/kelch-repeat protein At5g42350-like [Vitis
           vinifera]
          Length = 580

 Score =  201 bits (510), Expect = 7e-50
 Identities = 92/121 (76%), Positives = 103/121 (85%)
 Frame = +3

Query: 3   LISCNGRLLMLSVSWCEQDGQSSWREKAVRKLWELDLMHFTWSEISRHPDAPMDWNAAFV 182
           L+SCNGRL MLSVSWCE DGQ   R KAVRKLWELDLM+ TW+E+S HPDAPMDWNAAFV
Sbjct: 460 LVSCNGRLFMLSVSWCEGDGQIGRRNKAVRKLWELDLMYLTWTEVSIHPDAPMDWNAAFV 519

Query: 183 EDRGRIFGIEMFKIFGQVLDFLTVCNTSDLTLEWSRVSRKHVAHELDSSSCITKSLAVLH 362
            DR  IFG+EMFKIFGQVLDFLTVC+ SD    WS +SR HVAHELD+SSC+TKS+AVLH
Sbjct: 520 ADRNLIFGVEMFKIFGQVLDFLTVCDVSDKGTNWSHISRNHVAHELDASSCMTKSMAVLH 579

Query: 363 M 365
           +
Sbjct: 580 L 580


>ref|XP_002510700.1| hypothetical protein RCOM_1601660 [Ricinus communis]
           gi|223551401|gb|EEF52887.1| hypothetical protein
           RCOM_1601660 [Ricinus communis]
          Length = 583

 Score =  196 bits (498), Expect = 2e-48
 Identities = 90/121 (74%), Positives = 100/121 (82%)
 Frame = +3

Query: 3   LISCNGRLLMLSVSWCEQDGQSSWREKAVRKLWELDLMHFTWSEISRHPDAPMDWNAAFV 182
           L+SCN RL MLSVSWCE DGQ   R KAVRKLWELDLM+ TW+E+S HPDAPMDWNAAFV
Sbjct: 463 LVSCNSRLFMLSVSWCEGDGQIGQRNKAVRKLWELDLMYLTWTEVSVHPDAPMDWNAAFV 522

Query: 183 EDRGRIFGIEMFKIFGQVLDFLTVCNTSDLTLEWSRVSRKHVAHELDSSSCITKSLAVLH 362
            D+  IFG+EMFKIFGQVLDFLTVC  SD    WS +SR H+ HELD+SSCITKSLAVLH
Sbjct: 523 ADKNLIFGVEMFKIFGQVLDFLTVCYVSDTGTNWSHISRNHMTHELDASSCITKSLAVLH 582

Query: 363 M 365
           +
Sbjct: 583 L 583


>ref|XP_002307801.1| predicted protein [Populus trichocarpa] gi|222857250|gb|EEE94797.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  190 bits (482), Expect = 1e-46
 Identities = 85/121 (70%), Positives = 100/121 (82%)
 Frame = +3

Query: 3   LISCNGRLLMLSVSWCEQDGQSSWREKAVRKLWELDLMHFTWSEISRHPDAPMDWNAAFV 182
           L+SCNG+L MLSVSWCE DGQ   R KAVRKLWELDLM+  W+E+S HPDAPMDWNAAFV
Sbjct: 461 LVSCNGQLFMLSVSWCEGDGQIGQRNKAVRKLWELDLMYLNWTEVSVHPDAPMDWNAAFV 520

Query: 183 EDRGRIFGIEMFKIFGQVLDFLTVCNTSDLTLEWSRVSRKHVAHELDSSSCITKSLAVLH 362
            D+  IFG+EMFKIFGQVLDFLTVC+ SD    WS ++R H+ HE D+SSC+TKSLAVL+
Sbjct: 521 ADKNLIFGVEMFKIFGQVLDFLTVCDVSDTGTNWSHIARNHMTHEFDASSCMTKSLAVLY 580

Query: 363 M 365
           +
Sbjct: 581 L 581


>ref|XP_002300636.1| predicted protein [Populus trichocarpa] gi|222842362|gb|EEE79909.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  187 bits (476), Expect = 6e-46
 Identities = 85/121 (70%), Positives = 100/121 (82%)
 Frame = +3

Query: 3   LISCNGRLLMLSVSWCEQDGQSSWREKAVRKLWELDLMHFTWSEISRHPDAPMDWNAAFV 182
           L+SCN +L MLSVSWCE DGQ   R KAVRKLWELDLM+ TW+E+S HPDAPMDWNAAFV
Sbjct: 344 LVSCNDQLFMLSVSWCEGDGQIGQRNKAVRKLWELDLMYLTWTEVSLHPDAPMDWNAAFV 403

Query: 183 EDRGRIFGIEMFKIFGQVLDFLTVCNTSDLTLEWSRVSRKHVAHELDSSSCITKSLAVLH 362
            D+  IFG+EMFKIFGQVL+FLTVC+ S     WS ++R H+ HELD+SSC+TKSLAVLH
Sbjct: 404 ADKNLIFGVEMFKIFGQVLNFLTVCDVSGRGTNWSHLARNHMTHELDASSCMTKSLAVLH 463

Query: 363 M 365
           +
Sbjct: 464 L 464


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