BLASTX nr result

ID: Cimicifuga21_contig00029897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029897
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234152.1| cytosolic malate dehydrogenase [Solanum lyco...   204   8e-51
ref|XP_002511634.1| malate dehydrogenase, putative [Ricinus comm...   199   2e-49
ref|XP_004133776.1| PREDICTED: malate dehydrogenase, cytoplasmic...   197   1e-48
ref|XP_002301252.1| predicted protein [Populus trichocarpa] gi|2...   193   1e-47
ref|XP_002277543.1| PREDICTED: malate dehydrogenase, cytoplasmic...   193   1e-47

>ref|NP_001234152.1| cytosolic malate dehydrogenase [Solanum lycopersicum]
           gi|52139818|gb|AAU29199.1| cytosolic malate
           dehydrogenase [Solanum lycopersicum]
          Length = 334

 Score =  204 bits (518), Expect = 8e-51
 Identities = 98/120 (81%), Positives = 102/120 (85%)
 Frame = +2

Query: 2   KLVANDQWLKNEFITTVQQRGAAIIQARKXXXXXXXXXXXCDHMRDWVLGTPKGTWVSMG 181
           +LVANDQWL  EFITTVQQRGAAII+ARK           CDH+ DWVLGTPKGTWVSMG
Sbjct: 214 ELVANDQWLNTEFITTVQQRGAAIIKARKLSSALSAASSACDHIHDWVLGTPKGTWVSMG 273

Query: 182 VYSDGSYGIPSGLIYSFPVTCEKGEWSIVQGLKIDEFSRTKMDGTANELIEEKSLAYSCL 361
           VYSDGSYGIP+GLIYSFPVTCEKGEWSIVQGLKIDEFSR KMD TA EL EEKSLAYSCL
Sbjct: 274 VYSDGSYGIPAGLIYSFPVTCEKGEWSIVQGLKIDEFSRAKMDATAKELAEEKSLAYSCL 333


>ref|XP_002511634.1| malate dehydrogenase, putative [Ricinus communis]
           gi|223548814|gb|EEF50303.1| malate dehydrogenase,
           putative [Ricinus communis]
          Length = 332

 Score =  199 bits (506), Expect = 2e-49
 Identities = 97/120 (80%), Positives = 101/120 (84%)
 Frame = +2

Query: 2   KLVANDQWLKNEFITTVQQRGAAIIQARKXXXXXXXXXXXCDHMRDWVLGTPKGTWVSMG 181
           +LVA+DQWL  EFITTVQQRGAAII+ARK           CDH+RDWVLGTPKGTWVSMG
Sbjct: 212 ELVADDQWLNAEFITTVQQRGAAIIKARKLSSALSAASAACDHIRDWVLGTPKGTWVSMG 271

Query: 182 VYSDGSYGIPSGLIYSFPVTCEKGEWSIVQGLKIDEFSRTKMDGTANELIEEKSLAYSCL 361
           VYSDGSYGI  GLIYSFPVTCEKG WSIVQGLKIDEFSR KMD TA ELIEEKSLAYSCL
Sbjct: 272 VYSDGSYGIQPGLIYSFPVTCEKGNWSIVQGLKIDEFSRAKMDATAKELIEEKSLAYSCL 331


>ref|XP_004133776.1| PREDICTED: malate dehydrogenase, cytoplasmic-like [Cucumis sativus]
          Length = 364

 Score =  197 bits (500), Expect = 1e-48
 Identities = 95/120 (79%), Positives = 101/120 (84%)
 Frame = +2

Query: 2   KLVANDQWLKNEFITTVQQRGAAIIQARKXXXXXXXXXXXCDHMRDWVLGTPKGTWVSMG 181
           +LVA+DQWL  EFI TVQQRGAAII+ARK           CDH+R+WVLGTPKGTWVSMG
Sbjct: 244 ELVADDQWLNTEFIATVQQRGAAIIKARKLSSALSAASAACDHIRNWVLGTPKGTWVSMG 303

Query: 182 VYSDGSYGIPSGLIYSFPVTCEKGEWSIVQGLKIDEFSRTKMDGTANELIEEKSLAYSCL 361
           VYSDGSYGI  GLIYSFPVTCEKGEWSIVQGLKIDEFSR KMD TA ELIEEK+LAYSCL
Sbjct: 304 VYSDGSYGIERGLIYSFPVTCEKGEWSIVQGLKIDEFSRAKMDATAKELIEEKALAYSCL 363


>ref|XP_002301252.1| predicted protein [Populus trichocarpa] gi|222842978|gb|EEE80525.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score =  193 bits (490), Expect = 1e-47
 Identities = 90/120 (75%), Positives = 102/120 (85%)
 Frame = +2

Query: 2   KLVANDQWLKNEFITTVQQRGAAIIQARKXXXXXXXXXXXCDHMRDWVLGTPKGTWVSMG 181
           +LV++D+WL  EFITTVQQRGAA+I+ARK           CDH+RDWVLGTP+GTWVSMG
Sbjct: 212 ELVSDDKWLNAEFITTVQQRGAAVIKARKLSSALSAASAACDHIRDWVLGTPEGTWVSMG 271

Query: 182 VYSDGSYGIPSGLIYSFPVTCEKGEWSIVQGLKIDEFSRTKMDGTANELIEEKSLAYSCL 361
           VYSDGSYGI  GL+YSFPVTCEKG+WSIVQGLKID+FSR KMD TA EL+EEKSLAYSCL
Sbjct: 272 VYSDGSYGIQPGLVYSFPVTCEKGKWSIVQGLKIDDFSRAKMDATAKELVEEKSLAYSCL 331


>ref|XP_002277543.1| PREDICTED: malate dehydrogenase, cytoplasmic [Vitis vinifera]
           gi|297734557|emb|CBI16608.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score =  193 bits (490), Expect = 1e-47
 Identities = 91/120 (75%), Positives = 100/120 (83%)
 Frame = +2

Query: 2   KLVANDQWLKNEFITTVQQRGAAIIQARKXXXXXXXXXXXCDHMRDWVLGTPKGTWVSMG 181
           +L+A+D W+  EFITTVQQRGAAII+ARK           CDH+RDWVLGTPKG WVSMG
Sbjct: 212 ELIADDNWINTEFITTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPKGAWVSMG 271

Query: 182 VYSDGSYGIPSGLIYSFPVTCEKGEWSIVQGLKIDEFSRTKMDGTANELIEEKSLAYSCL 361
           VYSDGSYGI  G+IYSFPVTCEKGEWSIVQGLKIDEFSR KMD TA EL+EEK+LAYSCL
Sbjct: 272 VYSDGSYGIQPGIIYSFPVTCEKGEWSIVQGLKIDEFSRGKMDATAKELMEEKALAYSCL 331


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