BLASTX nr result

ID: Cimicifuga21_contig00029880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029880
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526949.1| protein binding protein, putative [Ricinus c...    73   5e-12
ref|XP_002300070.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
ref|XP_003618794.1| hypothetical protein MTR_6g022040 [Medicago ...    67   3e-10
ref|NP_001239668.1| uncharacterized protein LOC100815369 [Glycin...    67   1e-09
ref|XP_003547687.1| PREDICTED: uncharacterized protein LOC100797...    63   4e-09

>ref|XP_002526949.1| protein binding protein, putative [Ricinus communis]
           gi|223533701|gb|EEF35436.1| protein binding protein,
           putative [Ricinus communis]
          Length = 163

 Score = 72.8 bits (177), Expect(2) = 5e-12
 Identities = 33/54 (61%), Positives = 42/54 (77%)
 Frame = -2

Query: 259 FRGKERGDGDYLHMVGVGEMDKVFLLEDPAITEKKLNGSSRNQVVGQSCPTISI 98
           F+GKER DG+YLHM+GV + DKVFLLEDPAI E+KL+  +  Q +G  C TIS+
Sbjct: 110 FKGKEREDGEYLHMLGVRDKDKVFLLEDPAIKERKLHSMAGGQPIGTPCRTISV 163



 Score = 22.7 bits (47), Expect(2) = 5e-12
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 299 SIEATSTFGNFLLV 258
           SIEATSTFG   +V
Sbjct: 81  SIEATSTFGELKMV 94


>ref|XP_002300070.1| predicted protein [Populus trichocarpa] gi|222847328|gb|EEE84875.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 32/54 (59%), Positives = 41/54 (75%)
 Frame = -2

Query: 259 FRGKERGDGDYLHMVGVGEMDKVFLLEDPAITEKKLNGSSRNQVVGQSCPTISI 98
           F+GKER + +YLHMVGV + DKV LLEDPAI E+KL+G +  Q +G  C TIS+
Sbjct: 111 FKGKERDNSEYLHMVGVRDKDKVLLLEDPAIKERKLHGLAGGQAIGTPCRTISV 164


>ref|XP_003618794.1| hypothetical protein MTR_6g022040 [Medicago truncatula]
           gi|355493809|gb|AES75012.1| hypothetical protein
           MTR_6g022040 [Medicago truncatula]
          Length = 154

 Score = 67.0 bits (162), Expect(2) = 3e-10
 Identities = 30/54 (55%), Positives = 39/54 (72%)
 Frame = -2

Query: 259 FRGKERGDGDYLHMVGVGEMDKVFLLEDPAITEKKLNGSSRNQVVGQSCPTISI 98
           ++GKER D ++LHM+GV + DKV LLEDPAI E KL G +R Q +   CPTI +
Sbjct: 101 YKGKERDDNEFLHMIGVRDKDKVLLLEDPAIKEMKLLGLARGQHIRNPCPTICV 154



 Score = 22.7 bits (47), Expect(2) = 3e-10
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 299 SIEATSTFGNFLLV 258
           SIEATSTFG   +V
Sbjct: 72  SIEATSTFGELKMV 85


>ref|NP_001239668.1| uncharacterized protein LOC100815369 [Glycine max]
           gi|255647856|gb|ACU24387.1| unknown [Glycine max]
          Length = 159

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/53 (60%), Positives = 39/53 (73%)
 Frame = -2

Query: 259 FRGKERGDGDYLHMVGVGEMDKVFLLEDPAITEKKLNGSSRNQVVGQSCPTIS 101
           FRGKE+ D ++LHMVGV + DKV LLEDPAI E KL G +R Q +  +C TIS
Sbjct: 106 FRGKEKEDNEFLHMVGVRDKDKVLLLEDPAIKEMKLLGMARGQPINNTCCTIS 158


>ref|XP_003547687.1| PREDICTED: uncharacterized protein LOC100797703 [Glycine max]
          Length = 157

 Score = 63.2 bits (152), Expect(2) = 4e-09
 Identities = 33/54 (61%), Positives = 38/54 (70%)
 Frame = -2

Query: 259 FRGKERGDGDYLHMVGVGEMDKVFLLEDPAITEKKLNGSSRNQVVGQSCPTISI 98
           F+GKER D +YLHMVGV + DKV L EDPAI EKKL G  RNQ +     TIS+
Sbjct: 105 FKGKEREDDEYLHMVGVRDKDKVLLFEDPAIKEKKLLG-LRNQPINNPSRTISV 157



 Score = 22.3 bits (46), Expect(2) = 4e-09
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 299 SIEATSTFGNFLLV 258
           SIEATSTFG   ++
Sbjct: 76  SIEATSTFGELKMI 89


Top