BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029879
         (1560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22661.3| unnamed protein product [Vitis vinifera]              540   e-151
ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine l...   520   e-145
dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitre...   370   e-100
ref|XP_002967103.1| hypothetical protein SELMODRAFT_408505 [Sela...   357   5e-96
ref|XP_001776739.1| predicted protein [Physcomitrella patens sub...   356   8e-96

>emb|CBI22661.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  540 bits (1390), Expect = e-151
 Identities = 272/406 (66%), Positives = 321/406 (79%), Gaps = 5/406 (1%)
 Frame = -1

Query: 1560 VYKRGAWLERITMHYNLIAVSGTHGKSTTASMLAYVLSAMGDDITAIVGAHVPQFAGGNV 1381
            VYKRG WL ++T HYNLIAVSGTHGKSTTASMLAYVL +MGDD+TA+VGA VPQF GGN+
Sbjct: 143  VYKRGNWLGKLTEHYNLIAVSGTHGKSTTASMLAYVLKSMGDDLTAVVGAQVPQFGGGNI 202

Query: 1380 LWGHSLNFVLEADEYDGCFLQLSPEIAVITNVEWEHADIFRDEVW*LLNLEAVKNSFKRF 1201
            + G   NFVLEADEYD CFL L P IAV+TNV+WEH DIF DE       EAVK  F+RF
Sbjct: 203  MSGSGRNFVLEADEYDCCFLGLLPYIAVVTNVDWEHVDIFPDE-------EAVKAIFRRF 255

Query: 1200 LRKIRVGGHLILCGDSEGAYSLLSHASIGTVP-----KSSEWSSQPLDSVYRVTTYGISN 1036
            L++IRVGGHLILCGDS GA SLL      TV      K S  +S      YR+TT+GIS 
Sbjct: 256  LKQIRVGGHLILCGDSAGACSLLDDTEESTVADHSSGKLSTLNSDKCSDGYRITTFGISR 315

Query: 1035 PNEWHASSIRSNSRGGTDYVLYHMGCPVADISLQLAGVHNVLNSLAVIATVRALISDRWP 856
             NEWHA SIR NS+GG+D+VL H G PVA+I+LQ+ GVHNVLNSLAVIATV AL+SD   
Sbjct: 316  TNEWHALSIRPNSQGGSDFVLCHRGYPVANITLQIPGVHNVLNSLAVIATVMALVSDGRQ 375

Query: 855  TEKLIDCIKLNLHNFIGISRRFEMIGNINGCHIFDDYAHHPTEVHAVIRAARQRFPLKAL 676
            + + I+C+K++L+NF+G+SRRFE+IG + GC I+DDYAHHPTEV AV++AARQRFPLKAL
Sbjct: 376  SYESINCVKIHLNNFVGVSRRFELIGTVCGCLIYDDYAHHPTEVRAVLQAARQRFPLKAL 435

Query: 675  LVVFQPHTFSRLATFMKDFATALGDADRVVISEVYTSRETNNWNVSGRDLAISIIGPPSE 496
            LVVFQPHT+SRLA    DFATA  DAD+V+++E+Y +RETN WNVSG+DLA SIIGPPSE
Sbjct: 436  LVVFQPHTYSRLAALKSDFATAFSDADQVLVTEIYAARETNVWNVSGKDLATSIIGPPSE 495

Query: 495  YIPCVANVVDKLALEISSNPGRELVVLTLGAGDVTDVGPKLLQKLQ 358
            YIP + +VVDKLA +IS  P RE VV TLGAGD+T VGPKLL +LQ
Sbjct: 496  YIPSLGDVVDKLAHQISLEPDRETVVFTLGAGDITTVGPKLLHELQ 541


>ref|XP_003634123.1| PREDICTED: UDP-N-acetylmuramate--L-alanine ligase-like [Vitis
            vinifera]
          Length = 541

 Score =  520 bits (1339), Expect = e-145
 Identities = 262/394 (66%), Positives = 311/394 (78%), Gaps = 5/394 (1%)
 Frame = -1

Query: 1560 VYKRGAWLERITMHYNLIAVSGTHGKSTTASMLAYVLSAMGDDITAIVGAHVPQFAGGNV 1381
            VYKRG WL ++T HYNLIAVSGTHGKSTTASMLAYVL +MGDD+TA+VGA VPQF GGN+
Sbjct: 116  VYKRGNWLGKLTEHYNLIAVSGTHGKSTTASMLAYVLKSMGDDLTAVVGAQVPQFGGGNI 175

Query: 1380 LWGHSLNFVLEADEYDGCFLQLSPEIAVITNVEWEHADIFRDEVW*LLNLEAVKNSFKRF 1201
            + G   NFVLEADEYD CFL L P IAV+TNV+WEH DIF DE       EAVK  F+RF
Sbjct: 176  MSGSGRNFVLEADEYDCCFLGLLPYIAVVTNVDWEHVDIFPDE-------EAVKAIFRRF 228

Query: 1200 LRKIRVGGHLILCGDSEGAYSLLSHASIGTVP-----KSSEWSSQPLDSVYRVTTYGISN 1036
            L++IRVGGHLILCGDS GA SLL      TV      K S  +S      YR+TT+GIS 
Sbjct: 229  LKQIRVGGHLILCGDSAGACSLLDDTEESTVADHSSGKLSTLNSDKCSDGYRITTFGISR 288

Query: 1035 PNEWHASSIRSNSRGGTDYVLYHMGCPVADISLQLAGVHNVLNSLAVIATVRALISDRWP 856
             NEWHA SIR NS+GG+D+VL H G PVA+I+LQ+ GVHNVLNSLAVIATV AL+SD   
Sbjct: 289  TNEWHALSIRPNSQGGSDFVLCHRGYPVANITLQIPGVHNVLNSLAVIATVMALVSDGRQ 348

Query: 855  TEKLIDCIKLNLHNFIGISRRFEMIGNINGCHIFDDYAHHPTEVHAVIRAARQRFPLKAL 676
            + + I+C+K++L+NF+G+SRRFE+IG + GC I+DDYAHHPTEV AV++AARQRFPLKAL
Sbjct: 349  SYESINCVKIHLNNFVGVSRRFELIGTVCGCLIYDDYAHHPTEVRAVLQAARQRFPLKAL 408

Query: 675  LVVFQPHTFSRLATFMKDFATALGDADRVVISEVYTSRETNNWNVSGRDLAISIIGPPSE 496
            LVVFQPHT+SRLA    DFATA  DAD+V+++E+Y +RETN WNVSG+DLA SIIGPPSE
Sbjct: 409  LVVFQPHTYSRLAALKSDFATAFSDADQVLVTEIYAARETNVWNVSGKDLATSIIGPPSE 468

Query: 495  YIPCVANVVDKLALEISSNPGRELVVLTLGAGDV 394
            YIP + +VVDKLA +IS  P RE VV TLGAG++
Sbjct: 469  YIPSLGDVVDKLAHQISLEPDRETVVFTLGAGNM 502


>dbj|BAE45866.1| UDP-N-acetylmuramate-alanine ligase [Physcomitrella patens]
          Length = 615

 Score =  370 bits (949), Expect = e-100
 Identities = 201/415 (48%), Positives = 276/415 (66%), Gaps = 17/415 (4%)
 Frame = -1

Query: 1560 VYKRGAWLERITMHYNLIAVSGTHGKSTTASMLAYVLSAMGDDITAIVGAHVPQFA-GGN 1384
            +YKRG WL +IT  Y LIAV+GTHGK+TT +ML+ VL  +G+DITAIVGA VPQF  GG+
Sbjct: 207  IYKRGDWLGKITEGYQLIAVAGTHGKTTTTAMLSVVLRNLGEDITAIVGAQVPQFPDGGS 266

Query: 1383 VLWGHSLNFVLEADEYDGCFLQLSPEIAVITNVEWEHADIFRDEVW*LLNLEAVKNSFKR 1204
             L G +  FVLEADEYDGCFL +SP +AV+TNVEWEH D+F DE       EAVKN FK+
Sbjct: 267  ALCGTTRKFVLEADEYDGCFLGVSPHLAVLTNVEWEHVDMFPDE-------EAVKNMFKK 319

Query: 1203 FLRKIRVGGHLILCGDSEGAYSLLSHASIGTVPKSSEWS-SQPLDSVYRVTTYGISNPNE 1027
            F+ +I+ GG L+ CGDS GA S+L     G + +  E     P     RV T+G+   ++
Sbjct: 320  FVLQIKPGGCLVACGDSAGAKSVL-----GLIEEEQEKDLGSPFPRERRVVTFGLG-ASD 373

Query: 1026 WHASSIRSNSRGGTDYVLYHMGCPVADISLQLAGVHNVLNSLAVIATVRALISDRWPT-- 853
            W A  +  N +GGTDY + +   P+  +SL+L G++NVLNSLAVI  +  L +++     
Sbjct: 374  WRAIMLVPNPQGGTDYTVVYKNRPMTRVSLRLPGMYNVLNSLAVIVVMSLLAAEKESDVG 433

Query: 852  ------EKLIDCIKLNLHNFIGISRRFEMIGNINGCHIFDDYAHHPTEVHAVIRAARQRF 691
                  ++  +     L  F G+ RRF+ +G+++GCHI DDYAHHPTEV AV++AARQR+
Sbjct: 434  AQAKLMKRTAEAAGRALGAFSGVRRRFDFVGSVHGCHIIDDYAHHPTEVRAVLQAARQRY 493

Query: 690  PLKALLVVFQPHTFSRLATFMKDFATALGDADRVVISEVYTSRETNNWN-VSGRDLAISI 514
              + + V+FQPHT SRLA F+ DFA A   ADRV++++VY +R       V+G DLA +I
Sbjct: 494  DQQPIWVIFQPHTVSRLAAFLPDFAPAFSAADRVIVTQVYAARNIPTEKVVTGEDLANAI 553

Query: 513  IGPPSEYIPCVANVVDKLALEISS------NPGRELVVLTLGAGDVTDVGPKLLQ 367
            IGPP+ YIP +  VV++L+ E+++      N    +V+LTLGAGD+TDVG +L+Q
Sbjct: 554  IGPPAVYIPDLDVVVERLSWELAALDKNEMNDRGNIVLLTLGAGDITDVGRRLMQ 608


>ref|XP_002967103.1| hypothetical protein SELMODRAFT_408505 [Selaginella moellendorffii]
            gi|300165094|gb|EFJ31702.1| hypothetical protein
            SELMODRAFT_408505 [Selaginella moellendorffii]
          Length = 521

 Score =  357 bits (916), Expect = 5e-96
 Identities = 197/416 (47%), Positives = 263/416 (63%), Gaps = 16/416 (3%)
 Frame = -1

Query: 1560 VYKRGAWLERITMHYNLIAVSGTHGKSTTASMLAYVLSAMGDDITAIVGAHVPQFAGGNV 1381
            V KR  WL  IT  Y LIAV+GTHGKSTT +ML  VL +  DDITAIVGA VPQ AGGN+
Sbjct: 123  VIKRKEWLGEITEDYELIAVAGTHGKSTTTAMLTVVLQSFSDDITAIVGADVPQLAGGNM 182

Query: 1380 LWGHSLNFVLEADEYDGCFLQLSPEIAVITNVEWEHADIFRDEVW*LLNLEAVKNSFKRF 1201
             +G    FVLEADEYDGCFL +SP +A++T+VEWEH D+F DE        +V+  FK F
Sbjct: 183  AYGKGGRFVLEADEYDGCFLGVSPSLAIVTSVEWEHVDMFPDEA-------SVREMFKHF 235

Query: 1200 LRKIRVGGHLILCGDSEGAYSLLSHASIGTVPKSSEWSSQPLDSVYRVTTYGISNPNEWH 1021
            + +I+  G LI+CGDS G  SL++     ++ + S+ +S+ L       TYG+   N+W 
Sbjct: 236  ISRIKPDGCLIICGDSAGTRSLIT-----SLEQYSKQASRKL-------TYGLHEQNDWR 283

Query: 1020 ASSIRSNSRGGTDYVLYHMGCPVADISLQLAGVHNVLNSLAVIATVRALI------SDRW 859
            A  +  N  GGTDYV  +   P+A +SL+L G +NVLNSLAV+A V  L        D  
Sbjct: 284  AIMLVPNILGGTDYVAVYRNRPMARVSLKLPGTYNVLNSLAVLAAVSLLAFKGKGSCDES 343

Query: 858  PTEKLI----DCIKLNLHNFIGISRRFEMIGNINGCHIFDDYAHHPTEVHAVIRAARQRF 691
               K +          L +F G+ RRFE +G +  C I+DDYAHHPTEV AV++AARQRF
Sbjct: 344  GQLKAMAVAAQAASSALQSFQGLRRRFEYVGTVRRCDIYDDYAHHPTEVRAVLQAARQRF 403

Query: 690  PLKALLVVFQPHTFSRLATFMKDFATALGDADRVVISEVYTSRETNNWNVSGRDLAISII 511
              + + VVFQPHT+SR+A  ++DFA A   A+R     ++++RE N W +SG DL   I 
Sbjct: 404  DKQPIWVVFQPHTYSRIANLLQDFAPAFSGANR-----IFSARENNVWELSGADLVSVIT 458

Query: 510  GPPSEYIPCVANVVDKLALEISS------NPGRELVVLTLGAGDVTDVGPKLLQKL 361
            GPP+ +IP +  V+++L+ E+++      N G  +V+LTLGAGDVT VGPKLL  L
Sbjct: 459  GPPAMFIPTLDEVIERLSWELTALEENEVNKGGNIVLLTLGAGDVTSVGPKLLDAL 514


>ref|XP_001776739.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162671888|gb|EDQ58433.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 680

 Score =  356 bits (914), Expect = 8e-96
 Identities = 204/448 (45%), Positives = 279/448 (62%), Gaps = 51/448 (11%)
 Frame = -1

Query: 1557 YKRGAWLERITMHYNLIAVSGTHGKSTTASMLAYVLSAMGDDITAIVGAHVPQFA-GGNV 1381
            YKRG WL +IT  Y LIAV+GTHGK+TT +ML+ VL  +G+DITAIVGA VPQF  GG+ 
Sbjct: 232  YKRGDWLGKITEGYQLIAVAGTHGKTTTTAMLSVVLRNLGEDITAIVGAQVPQFPDGGSA 291

Query: 1380 LWGHSLNFVLE--------------ADEYDGCFLQLSPEIAVITNVEWEHADIFRDEVW* 1243
            L G +  FVLE              ADEYDGCFL +SP +AV+TNVEWEH D+F DE   
Sbjct: 292  LCGTTRKFVLESQVRPVLWFHKFSEADEYDGCFLGVSPHLAVLTNVEWEHVDMFPDERGC 351

Query: 1242 LLNL--------------------EAVKNSFKRFLRKIRVGGHLILCGDSEGAYSLLSHA 1123
            LLN+                    EAVKN FK+F+ +I+ GG L+ CGDS GA S+L   
Sbjct: 352  LLNVTPSIDLFDQPLIVSMENILQEAVKNMFKKFVLQIKPGGCLVACGDSAGAKSVL--- 408

Query: 1122 SIGTVPKSSEWS-SQPLDSVYRVTTYGISNPNEWHASSIRSNSRGGTDYVLYHMGCPVAD 946
              G + +  E     P     RV T+G+   ++W A  +  N +GGTDY + +   P+  
Sbjct: 409  --GLIEEEQEKDLGSPFPRERRVVTFGLG-ASDWRAIMLVPNPQGGTDYTVVYKNRPMTR 465

Query: 945  ISLQLAGVHNVLNSLAVIATVRALISDRWPT--------EKLIDCIKLNLHNFIGISRRF 790
            +SL+L G++NVLNSLAVI  +  L +++           ++  +     L  F G+ RRF
Sbjct: 466  VSLRLPGMYNVLNSLAVIVVMSLLAAEKESDVGAQAKLMKRTAEAAGRALGAFSGVRRRF 525

Query: 789  EMIGNINGCHIFDDYAHHPTEVHAVIRAARQRFPLKALLVVFQPHTFSRLATFMKDFATA 610
            + +G+++GCHI DDYAHHPTEV AV++AARQR+  + + V+FQPHT SRLA F+ DFA A
Sbjct: 526  DFVGSVHGCHIIDDYAHHPTEVRAVLQAARQRYDQQPIWVIFQPHTVSRLAAFLPDFAPA 585

Query: 609  LGDADRVVISEVYTSRETNNWN-VSGRDLAISIIGPPSEYIPCVANVVDKLALEISS--- 442
               ADRV++++VY +R       V+G DLA +IIGPP+ YIP +  VV++L+ E+++   
Sbjct: 586  FSAADRVIVTQVYAARNIPTEKVVTGEDLANAIIGPPAVYIPDLDVVVERLSWELAALDK 645

Query: 441  ---NPGRELVVLTLGAGDVTDVGPKLLQ 367
               N    +V+LTLGAGD+TDVG +L+Q
Sbjct: 646  NEMNDRGNIVLLTLGAGDITDVGRRLMQ 673