BLASTX nr result

ID: Cimicifuga21_contig00029870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029870
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249...   211   1e-52
ref|XP_002526688.1| conserved hypothetical protein [Ricinus comm...   207   2e-51
ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|2...   191   1e-46
ref|XP_003623391.1| Integrator complex subunit [Medicago truncat...   168   1e-39
ref|XP_004147305.1| PREDICTED: uncharacterized protein LOC101203...   166   5e-39

>ref|XP_002264741.2| PREDICTED: uncharacterized protein LOC100249976 [Vitis vinifera]
          Length = 1007

 Score =  211 bits (537), Expect = 1e-52
 Identities = 115/224 (51%), Positives = 145/224 (64%), Gaps = 5/224 (2%)
 Frame = -3

Query: 764  ELHVLELILVTCVLRLCMGEICCRLTTLKRLGATISCVELLCETGNTKLSEFCREVKSFC 585
            ELHVLELILVTC+LRL   EICC   TLK+L   IS  E L + G+ +   F  E+K   
Sbjct: 731  ELHVLELILVTCILRLSKVEICCHNATLKKLSMIISHAEFLHKEGSIEPYNFVVELKKSL 790

Query: 584  QEKSPFY-----YPFDSKRLLELFSFKQIVFTEKIKHVKAEVDVPGNDSENPLPFVSGLP 420
             E   +       PF  KRLLE FS KQ   +   KH+KAE+D+PGND+E PLPF+SGLP
Sbjct: 791  GEIDTYNDGASCRPFLLKRLLESFSLKQFRLSGSPKHIKAEIDLPGNDTE-PLPFISGLP 849

Query: 419  APITFQITVHNVCSEDKLWLKMAVEEETIQYVFLDFNQFDEDCDDCIRKATLSVPFYRTP 240
              I  +IT++NV SE++LWL+M V E+ +++VFLD NQ    CD+ +RK T   PFYRTP
Sbjct: 850  VGIPLEITLYNVSSENRLWLRMIVHEQLMEFVFLDLNQ-SGGCDE-VRKFTFMAPFYRTP 907

Query: 239  KAASFSLMACICKECPLEDVQLATSVGGPKRELTFLCDDMKVYL 108
            KA S +L  CI  EC  EDV L T  GGP REL ++C + +VYL
Sbjct: 908  KAMSLTLRVCIGMECLFEDVNLITDCGGPTRELVYICQEKEVYL 951


>ref|XP_002526688.1| conserved hypothetical protein [Ricinus communis]
            gi|223533988|gb|EEF35710.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 890

 Score =  207 bits (528), Expect = 2e-51
 Identities = 111/224 (49%), Positives = 139/224 (62%), Gaps = 5/224 (2%)
 Frame = -3

Query: 764  ELHVLELILVTCVLRLCMGEICCRLTTLKRLGATISCVELLCETGNTKLSEFCREVKSFC 585
            E +VLELILV C+LRL   EICC  TTLKRL ATIS +E L E G+ +LS F  EVK   
Sbjct: 666  ESYVLELILVACILRLSKAEICCYHTTLKRLSATISLIEFLHEEGSIELSNFVVEVKKTL 725

Query: 584  QEKS-----PFYYPFDSKRLLELFSFKQIVFTEKIKHVKAEVDVPGNDSENPLPFVSGLP 420
             E           PF   +L++ FS KQ      ++H+ A ++VP  DSENPLPFV GLP
Sbjct: 726  HESGISIGGTLCSPFGFMKLIDHFSIKQFSSCTGVRHLYAAMNVPNIDSENPLPFVPGLP 785

Query: 419  APITFQITVHNVCSEDKLWLKMAVEEETIQYVFLDFNQFDEDCDDCIRKATLSVPFYRTP 240
              I   IT+HNV SE +LWL++A+ EE+IQ++FLD N       D ++K T   PFYRTP
Sbjct: 786  VAIPLTITLHNVLSETRLWLRLAMSEESIQFLFLDLNILGG--SDEVKKCTFVAPFYRTP 843

Query: 239  KAASFSLMACICKECPLEDVQLATSVGGPKRELTFLCDDMKVYL 108
            K  SF+L  CI  EC  EDV    + GGPKR L +LC + +VYL
Sbjct: 844  KTGSFTLRVCIGMECMFEDVHSVKNFGGPKRRLVYLCPEKEVYL 887


>ref|XP_002323031.1| predicted protein [Populus trichocarpa] gi|222867661|gb|EEF04792.1|
            predicted protein [Populus trichocarpa]
          Length = 949

 Score =  191 bits (485), Expect = 1e-46
 Identities = 103/224 (45%), Positives = 138/224 (61%), Gaps = 5/224 (2%)
 Frame = -3

Query: 764  ELHVLELILVTCVLRLCMGEICCRLTTLKRLGATISCVELLCETGNTKLSEFCREVKSFC 585
            EL+VLELI+V C+LRL   EICC  TTLK+L A IS +E+L + G  + S    + K   
Sbjct: 722  ELYVLELIVVACMLRLSKVEICCSPTTLKKLSAIISHIEILNDKGPMEPSNILMDAKKTV 781

Query: 584  QEKSPFYYPFDSK-----RLLELFSFKQIVFTEKIKHVKAEVDVPGNDSENPLPFVSGLP 420
             E                 L++ F+ KQ     +++H+ AE+DVPGNDSENPLPFVSGLP
Sbjct: 782  HEIESSKAGISCSLFLITNLVDFFTLKQFSLCPRVRHINAELDVPGNDSENPLPFVSGLP 841

Query: 419  APITFQITVHNVCSEDKLWLKMAVEEETIQYVFLDFNQFDEDCDDCIRKATLSVPFYRTP 240
              I   IT++NV SE++LWL + + +E+ Q+VFLD N     C++ ++K T   PFYRTP
Sbjct: 842  VAIPLDITLYNVSSENRLWLTIRMSQESTQFVFLDSNILG-GCNE-VKKFTFMAPFYRTP 899

Query: 239  KAASFSLMACICKECPLEDVQLATSVGGPKRELTFLCDDMKVYL 108
            KA SFS    I  EC LED  L    GGPKR+L +LC + +V+L
Sbjct: 900  KARSFSSWISIGMECALEDCHLVKHCGGPKRKLVYLCQEKEVHL 943


>ref|XP_003623391.1| Integrator complex subunit [Medicago truncatula]
            gi|355498406|gb|AES79609.1| Integrator complex subunit
            [Medicago truncatula]
          Length = 906

 Score =  168 bits (425), Expect = 1e-39
 Identities = 95/224 (42%), Positives = 130/224 (58%), Gaps = 6/224 (2%)
 Frame = -3

Query: 764  ELHVLELILVTCVLRLCMGEICCRLTTLKRLGATISCVELLCETGNTKLSEFCREVKSF- 588
            EL++LE+ILVT  LRLC  E  C     KRL +  SCVE + +  +   + F  E++   
Sbjct: 678  ELNILEIILVTYALRLCKVETICVNLAFKRLTSIYSCVESILKERSDSPTNFVVELRKLL 737

Query: 587  --CQEKS---PFYYPFDSKRLLELFSFKQIVFTEKIKHVKAEVDVPGNDSENPLPFVSGL 423
              CQ  S       P    R L+LFS K+ VF   I+ +KAE+ +  NDS +P PFVSGL
Sbjct: 738  HECQTTSINGASCSPLQFDRCLKLFSLKKFVFHGTIRQLKAELRISNNDSLHPFPFVSGL 797

Query: 422  PAPITFQITVHNVCSEDKLWLKMAVEEETIQYVFLDFNQFDEDCDDCIRKATLSVPFYRT 243
            P  I  +IT+HN+ S+ KLWL+M++++  +QY+FLD +      D  +R    + PFYRT
Sbjct: 798  PVSIPCEITLHNIISKCKLWLRMSLDDGLVQYIFLDLDHLVGSGD--VRNFVFAAPFYRT 855

Query: 242  PKAASFSLMACICKECPLEDVQLATSVGGPKRELTFLCDDMKVY 111
            PKA SF+L  CI  EC  E+V      GGPK EL  LC + +VY
Sbjct: 856  PKANSFTLKVCISLECLFENVCPVQRYGGPKYELVSLCKEKQVY 899


>ref|XP_004147305.1| PREDICTED: uncharacterized protein LOC101203415 [Cucumis sativus]
            gi|449501277|ref|XP_004161326.1| PREDICTED:
            uncharacterized protein LOC101225075 [Cucumis sativus]
          Length = 815

 Score =  166 bits (420), Expect = 5e-39
 Identities = 93/231 (40%), Positives = 136/231 (58%), Gaps = 12/231 (5%)
 Frame = -3

Query: 764  ELHVLELILVTCVLRLCMGEICCRLTTLKRLGATISCVELL----CETGNTKLSEFCREV 597
            E H+LEL+LVTC+LRL  GE+CC LT L++L    S ++ L    C+  +T + E  R +
Sbjct: 588  EQHILELMLVTCILRLSNGEVCCHLTALRKLSTIASNIQHLLKEECKEPSTFVCEVQRSL 647

Query: 596  --------KSFCQEKSPFYYPFDSKRLLELFSFKQIVFTEKIKHVKAEVDVPGNDSENPL 441
                    KS C          D + +L+ F+   +  +E++KH+KAE+ +  N+ E PL
Sbjct: 648  SNLGTITPKSLCSS-------LDLREMLKSFTLGHLEISEELKHIKAELVISDNNYEKPL 700

Query: 440  PFVSGLPAPITFQITVHNVCSEDKLWLKMAVEEETIQYVFLDFNQFDEDCDDCIRKATLS 261
             FV GLP  I  QI +HNV SE KLW ++ ++  T Q+VFLDF      CD+ +R+   +
Sbjct: 701  YFVPGLPVGIPCQIILHNVPSERKLWFRITMDNVTSQFVFLDFLSLG-GCDE-VREFMYT 758

Query: 260  VPFYRTPKAASFSLMACICKECPLEDVQLATSVGGPKRELTFLCDDMKVYL 108
            VPFYRTPKA+SF    CI  EC  E+ ++    GGPK +L ++C + +VYL
Sbjct: 759  VPFYRTPKASSFIARICIGLECWFENAEVNERRGGPKCDLAYICKEKEVYL 809


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