BLASTX nr result

ID: Cimicifuga21_contig00029836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029836
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298791.1| predicted protein [Populus trichocarpa] gi|2...    62   1e-07
emb|CBI25129.3| unnamed protein product [Vitis vinifera]               61   2e-07
ref|XP_002271890.1| PREDICTED: uncharacterized protein LOC100241...    61   2e-07
ref|XP_002522110.1| sterol regulatory element-binding protein si...    61   2e-07
ref|NP_173229.1| ethylene-dependent gravitropism-deficient and y...    60   5e-07

>ref|XP_002298791.1| predicted protein [Populus trichocarpa] gi|222846049|gb|EEE83596.1|
           predicted protein [Populus trichocarpa]
          Length = 108

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/61 (57%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
 Frame = +1

Query: 436 MQIESAMPSTHWGYVSVIVL-LCKF*DMALMSDFFLKPDATFDDYLADVS-LFWWFSFRI 609
           +Q ES   ST WGY+S IVL +  F  +ALMS FFLKP+ATFDDY+ADV+ LF  F   +
Sbjct: 45  LQFESIKLSTPWGYISAIVLCVATFGTIALMSGFFLKPNATFDDYIADVAPLFGGFLTIL 104

Query: 610 G 612
           G
Sbjct: 105 G 105


>emb|CBI25129.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 32/49 (65%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +1

Query: 436 MQIESAMPSTHWGYVSVIVL-LCKF*DMALMSDFFLKPDATFDDYLADV 579
           +Q ES   ST WGY+S IVL +  F  +ALMS FFLKP+ATFDDYLADV
Sbjct: 144 LQFESTKLSTPWGYISSIVLCVATFGTIALMSGFFLKPNATFDDYLADV 192


>ref|XP_002271890.1| PREDICTED: uncharacterized protein LOC100241185 [Vitis vinifera]
           gi|147804805|emb|CAN73523.1| hypothetical protein
           VITISV_010704 [Vitis vinifera]
          Length = 579

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 32/49 (65%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +1

Query: 436 MQIESAMPSTHWGYVSVIVL-LCKF*DMALMSDFFLKPDATFDDYLADV 579
           +Q ES   ST WGY+S IVL +  F  +ALMS FFLKP+ATFDDYLADV
Sbjct: 267 LQFESTKLSTPWGYISSIVLCVATFGTIALMSGFFLKPNATFDDYLADV 315


>ref|XP_002522110.1| sterol regulatory element-binding protein site 2 protease, putative
           [Ricinus communis] gi|223538709|gb|EEF40310.1| sterol
           regulatory element-binding protein site 2 protease,
           putative [Ricinus communis]
          Length = 613

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = +1

Query: 436 MQIESAMPSTHWGYVSVIVL-LCKF*DMALMSDFFLKPDATFDDYLADV 579
           +Q ES   ST WGY+S + L +  F  +ALMS FFLKPDATFDDY+ADV
Sbjct: 301 LQFESTKLSTPWGYISAVALCVTTFGTIALMSGFFLKPDATFDDYIADV 349


>ref|NP_173229.1| ethylene-dependent gravitropism-deficient and yellow-green-like 3
           protein [Arabidopsis thaliana]
           gi|9665065|gb|AAF97267.1|AC034106_10 F2H15.10
           [Arabidopsis thaliana] gi|332191525|gb|AEE29646.1|
           ethylene-dependent gravitropism-deficient and
           yellow-green-like 3 protein [Arabidopsis thaliana]
          Length = 573

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = +1

Query: 436 MQIESAMPSTHWGYVSVIVL-LCKF*DMALMSDFFLKPDATFDDYLADV 579
           +Q ES   ST WGYVS I L +  F  +ALMS FFLKPDATFDDY+A+V
Sbjct: 260 LQFESTRLSTPWGYVSAIALCVTTFGTIALMSGFFLKPDATFDDYIANV 308


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