BLASTX nr result

ID: Cimicifuga21_contig00029828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029828
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15033.3| unnamed protein product [Vitis vinifera]              124   1e-26
ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase A...   119   3e-25
ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ric...   106   2e-21
emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Ara...    99   4e-19
sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kin...    99   4e-19

>emb|CBI15033.3| unnamed protein product [Vitis vinifera]
          Length = 3085

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/87 (64%), Positives = 66/87 (75%)
 Frame = -2

Query: 261 SLATNELSRCWLTIWSSLIHTLPIFVNVAPVADTALLLLGNIISKDLINIPTLPQDFWDL 82
           S  +NE    W TIWS L+H LPIF N+  V D AL+LLGNI+S DLI+ P +PQ+ WDL
Sbjct: 467 SFTSNEFDNGWHTIWSCLMHGLPIFSNITSVVDAALVLLGNIVSNDLISTPIVPQEIWDL 526

Query: 81  RLFTHMPSLSALYFIVCYFTRKGSQGD 1
           RLF HMPS+S LYFI CYF+RKGSQGD
Sbjct: 527 RLFKHMPSVSVLYFISCYFSRKGSQGD 553


>ref|XP_002279402.2| PREDICTED: serine/threonine-protein kinase ATM [Vitis vinifera]
          Length = 2956

 Score =  119 bits (297), Expect = 3e-25
 Identities = 53/77 (68%), Positives = 62/77 (80%)
 Frame = -2

Query: 231 WLTIWSSLIHTLPIFVNVAPVADTALLLLGNIISKDLINIPTLPQDFWDLRLFTHMPSLS 52
           W TIWS L+H LPIF N+  V D AL+LLGNI+S DLI+ P +PQ+ WDLRLF HMPS+S
Sbjct: 408 WHTIWSCLMHGLPIFSNITSVVDAALVLLGNIVSNDLISTPIVPQEIWDLRLFKHMPSVS 467

Query: 51  ALYFIVCYFTRKGSQGD 1
            LYFI CYF+RKGSQGD
Sbjct: 468 VLYFISCYFSRKGSQGD 484


>ref|XP_002511396.1| ataxia telangiectasia mutated, putative [Ricinus communis]
           gi|223550511|gb|EEF51998.1| ataxia telangiectasia
           mutated, putative [Ricinus communis]
          Length = 2954

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/82 (59%), Positives = 58/82 (70%)
 Frame = -2

Query: 246 ELSRCWLTIWSSLIHTLPIFVNVAPVADTALLLLGNIISKDLINIPTLPQDFWDLRLFTH 67
           EL   W  IWS LIH LP+F N   V + ALLLLGNI++ D++NI  +PQD WDL+LF  
Sbjct: 409 ELDSGWQLIWSHLIHGLPLFSNSTSVVNAALLLLGNILTSDMMNIFVVPQDIWDLKLFKQ 468

Query: 66  MPSLSALYFIVCYFTRKGSQGD 1
           MPS   LYFI CYF+ KGSQGD
Sbjct: 469 MPSRCVLYFIACYFSHKGSQGD 490


>emb|CAB86487.1| ataxia-telangiectasia mutated protein (Atm) [Arabidopsis thaliana]
          Length = 3856

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/88 (52%), Positives = 63/88 (71%)
 Frame = -2

Query: 264  SSLATNELSRCWLTIWSSLIHTLPIFVNVAPVADTALLLLGNIISKDLINIPTLPQDFWD 85
            SS +++EL R W +IWSSLIH L  F +++ + D  L+LLG+IIS + I +  LPQ+ WD
Sbjct: 1275 SSASSSELDRGWQSIWSSLIHGLATFSSMSVIVDAVLVLLGSIISSNHITVKILPQEVWD 1334

Query: 84   LRLFTHMPSLSALYFIVCYFTRKGSQGD 1
             +LF H+PS  ALYFI CYF+R G QG+
Sbjct: 1335 HQLFRHIPSEPALYFIACYFSRMGCQGN 1362


>sp|Q9M3G7.1|ATM_ARATH RecName: Full=Serine/threonine-protein kinase ATM; AltName:
            Full=Ataxia telangiectasia mutated homolog; Short=AtATM
            gi|7960715|emb|CAB92122.1| AtATM [Arabidopsis thaliana]
          Length = 3856

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 46/88 (52%), Positives = 63/88 (71%)
 Frame = -2

Query: 264  SSLATNELSRCWLTIWSSLIHTLPIFVNVAPVADTALLLLGNIISKDLINIPTLPQDFWD 85
            SS +++EL R W +IWSSLIH L  F +++ + D  L+LLG+IIS + I +  LPQ+ WD
Sbjct: 1275 SSASSSELDRGWQSIWSSLIHGLATFSSMSVIVDAVLVLLGSIISSNHITVKILPQEVWD 1334

Query: 84   LRLFTHMPSLSALYFIVCYFTRKGSQGD 1
             +LF H+PS  ALYFI CYF+R G QG+
Sbjct: 1335 HQLFRHIPSEPALYFIACYFSRMGCQGN 1362


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