BLASTX nr result

ID: Cimicifuga21_contig00029815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029815
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...    56   3e-06
emb|CAN67096.1| hypothetical protein VITISV_016807 [Vitis vinifera]    56   3e-06

>ref|XP_002273835.2| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Vitis
           vinifera]
          Length = 1044

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
 Frame = -3

Query: 310 RFPSSMNQNQRNCANKLGERKRLRISNEDV----LADEVLKGSGKASLKKIQTTPHEKA- 146
           R  S +NQ +     +L   K+L++S +D+    L D+  +G  K S K  Q   + +  
Sbjct: 559 RIISKVNQKRDK---RLRPSKKLKVSTDDISKYGLIDDTQEGHTKVSAKSTQPINNNQCN 615

Query: 145 PEDTAIYNEQPTKKVLTVAKDMSLRKCESGPAQVYCAFCQSSKDTKVS 2
           PE   +      KK L+     +LRKCES P ++ CAFC S++D++ S
Sbjct: 616 PEVRVLDYSSTAKKALSATSGGALRKCESIPNKISCAFCHSAQDSEAS 663


>emb|CAN67096.1| hypothetical protein VITISV_016807 [Vitis vinifera]
          Length = 952

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
 Frame = -3

Query: 310 RFPSSMNQNQRNCANKLGERKRLRISNEDV----LADEVLKGSGKASLKKIQTTPHEKA- 146
           R  S +NQ +     +L   K+L++S +D+    L D+  +G  K S K  Q   + +  
Sbjct: 502 RIISKVNQKRDK---RLRPSKKLKVSTDDISKYGLIDDTQEGHTKVSAKSTQPINNNQCN 558

Query: 145 PEDTAIYNEQPTKKVLTVAKDMSLRKCESGPAQVYCAFCQSSKDTKVS 2
           PE   +      KK L+     +LRKCES P ++ CAFC S++D++ S
Sbjct: 559 PEVRVLDYSSTAKKALSATSGGALRKCESIPNKISCAFCHSAQDSEAS 606


Top