BLASTX nr result

ID: Cimicifuga21_contig00029804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029804
         (1206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320811.1| predicted protein [Populus trichocarpa] gi|2...   300   5e-79
ref|XP_002276054.1| PREDICTED: uncharacterized protein LOC100258...   295   2e-77
emb|CBI40437.3| unnamed protein product [Vitis vinifera]              285   2e-74
ref|XP_003622497.1| Transmembrane protein 8B [Medicago truncatul...   279   9e-73
ref|XP_002511889.1| conserved hypothetical protein [Ricinus comm...   278   2e-72

>ref|XP_002320811.1| predicted protein [Populus trichocarpa] gi|222861584|gb|EEE99126.1|
            predicted protein [Populus trichocarpa]
          Length = 876

 Score =  300 bits (768), Expect = 5e-79
 Identities = 168/378 (44%), Positives = 231/378 (61%), Gaps = 41/378 (10%)
 Frame = +3

Query: 183  SWITICFSSHNELSTQKRFTIWSKYYPPTILKPYDWSYIRVDLPPGFSSVS------VDI 344
            S +  C  S N+L     FT+ S  YP T ++P+D  YIRVDLP  FSSVS      VD+
Sbjct: 26   SLLFCCSHSANQLGPYNTFTVSSFSYPTTNVRPFDLRYIRVDLPAWFSSVSITVQSDVDL 85

Query: 345  EIRFVKKLPRNKVPIICFGFGSPPLPNVSNTSL------------------TVL--GPPT 464
            + + + K+P++ +P+IC   GSPPLP+V N+SL                  TVL  G  +
Sbjct: 86   DAKSISKVPKSTLPLICIRDGSPPLPDVLNSSLIELVSLFESNEGKTEVAVTVLVSGSFS 145

Query: 465  RDSVVDIQVLQHVEQCHPLLKNIKLLLTNEQIFSGVWYIGLFHGIGLARTQPNKIIRGSS 644
              S   IQ  Q+V QC+P+ +NI   LTNEQI  GVWY+GLF+GIG  RTQ   IIR  S
Sbjct: 146  NGSFQRIQGPQNV-QCYPMQRNITATLTNEQISPGVWYLGLFNGIGPTRTQSKMIIRSPS 204

Query: 645  LSYSANIRVKGCLTSGVWGQYCNQTVVPLSCVQFES------------ETAENVTTCRNS 788
             S+SANI V+GC TS +WGQYCNQT+ P SC Q  S            +T +NV +C+  
Sbjct: 205  YSFSANISVEGCATSTMWGQYCNQTIDPFSCSQAYSYNPTEIFSGANLQTIQNVVSCKTF 264

Query: 789  FEICMGFSAPRGYSLDLFGMVEQLKIMAMDVSFNERPAKNIGN--VSGILY-ARYGAMPS 959
               C G   P+ Y+L++ G+ EQLKI+A +VSF   P  + GN  V+ +LY AR+GAMPS
Sbjct: 265  ESYCHGEGEPKVYALEVLGIAEQLKIVAANVSFTAAPTNSTGNASVANLLYFARHGAMPS 324

Query: 960  ISLHDYSIGVGETPLVIQSPKIGRWYVSLLPGKRTIGQRATKDKDIITDVCYSLDWELMK 1139
            ++L+DYS  + + PL+I+ PK+GRW+V++LP    + +     ++    VCYS+ W+L+ 
Sbjct: 325  MALYDYSGDMSKAPLIIRKPKVGRWFVTILP--TNLSKEVGGIQNTNMQVCYSITWQLLN 382

Query: 1140 CPVGKAGPNCAWESYMLK 1193
            CPVGKAG NC+ E YML+
Sbjct: 383  CPVGKAGLNCSSEKYMLQ 400


>ref|XP_002276054.1| PREDICTED: uncharacterized protein LOC100258534 [Vitis vinifera]
          Length = 823

 Score =  295 bits (755), Expect = 2e-77
 Identities = 165/368 (44%), Positives = 224/368 (60%), Gaps = 32/368 (8%)
 Frame = +3

Query: 186  WITICFSSHNELSTQKRFTIWSKYYPPTILKPYDWSYIRVDLPPGFSSVS------VDIE 347
            ++  CFS + E  +   F++ S  Y  T LKPY+W YIRV+LP  FSS+S      VDI 
Sbjct: 10   FLCFCFS-YEEYGSYNSFSVSSISYSKTKLKPYEWRYIRVELPLWFSSMSIALESDVDIG 68

Query: 348  IRFVKKLPRNKVPIICFGFGSPPLPNVSNTSLT-----------VLGPPTRDSVVDIQVL 494
                 K+P++ +P+ICF  GSPPLP+VSNT++            VLG  +  S      L
Sbjct: 69   TESTGKIPKSTLPMICFRNGSPPLPDVSNTTVKDLVHKGSSAVLVLGTLSNGSFGVTGGL 128

Query: 495  QHVEQCHPLLKNIKLLLTNEQIFSGVWYIGLFHGIGLARTQPNKIIRGSSLSYSANIRVK 674
            Q+ EQC+P+ KNI   LTNEQI  GVWY G+F+GIG  RTQ   I RGSS ++SAN+ V+
Sbjct: 129  QNTEQCYPMQKNITTRLTNEQISPGVWYFGVFNGIGPMRTQSKMISRGSSYTFSANVSVE 188

Query: 675  GCLTSGVWGQYCNQTVVPLSCV-----------QFESETAENVTTCRNSFE-ICMGFSAP 818
            GC TS + GQYCNQTV PLSCV             +++T EN  +CR+SFE  C     P
Sbjct: 189  GCTTSTMSGQYCNQTVNPLSCVLSDSSNFTESLSIDNQTTENFISCRSSFENSCHVDGEP 248

Query: 819  RGYSLDLFGMVEQLKIMAMDVSFNERPAKNIGNVSGI---LYARYGAMPSISLHDYSIGV 989
            + Y LD+ G+ EQL +  M+V FN   +   GNVS I     AR+G +P  +LHDYS  +
Sbjct: 249  KIYFLDVMGLPEQLSVTVMNVRFNGTSSNFTGNVSEINVMCLARHGTIPLPNLHDYSTNI 308

Query: 990  GETPLVIQSPKIGRWYVSLLPGKRTIGQRATKDKDIITDVCYSLDWELMKCPVGKAGPNC 1169
             + PLVI+SPK+GRWY ++LP    + +     +D    VCYS++W++++CP+GKAG NC
Sbjct: 309  NKAPLVIRSPKVGRWYFTILP--VNLSKEIGGIQDPTIKVCYSMEWKVLECPLGKAGLNC 366

Query: 1170 AWESYMLK 1193
              E YML+
Sbjct: 367  TQERYMLQ 374


>emb|CBI40437.3| unnamed protein product [Vitis vinifera]
          Length = 805

 Score =  285 bits (729), Expect = 2e-74
 Identities = 162/359 (45%), Positives = 219/359 (61%), Gaps = 23/359 (6%)
 Frame = +3

Query: 186  WITICFSSHNELSTQKRFTIWSKYYPPTILKPYDWSYIRVDLPPGFSSVS------VDIE 347
            ++  CFS + E  +   F++ S  Y  T LKPY+W YIRV+LP  FSS+S      VDI 
Sbjct: 10   FLCFCFS-YEEYGSYNSFSVSSISYSKTKLKPYEWRYIRVELPLWFSSMSIALESDVDIG 68

Query: 348  IRFVKKLPRNKVPIICFGFGSPPLPNVSNTSLT--VLGPPTRDSVVDIQVLQHVEQCHPL 521
                 K+P++ +P+ICF  GSPPLP+VSNT++   VLG  +  S      LQ+ EQC+P+
Sbjct: 69   TESTGKIPKSTLPMICFRNGSPPLPDVSNTTVKDLVLGTLSNGSFGVTGGLQNTEQCYPM 128

Query: 522  LKNIKLLLTNEQIFSGVWYIGLFHGIGLARTQPNKIIRGSSLSYSANIRVKGCLTSGVWG 701
             KNI   LTNEQI  GVWY G+F+GIG  RTQ   I RGSS ++SAN+ V+GC TS + G
Sbjct: 129  QKNITTRLTNEQISPGVWYFGVFNGIGPMRTQSKMISRGSSYTFSANVSVEGCTTSTMSG 188

Query: 702  QYCNQTVVPLSCV-----------QFESETAENVTTCRNSFE-ICMGFSAPRGYSLDLFG 845
            QYCNQTV PLSCV             +++T EN  +CR+SFE  C     P+ Y LD+ G
Sbjct: 189  QYCNQTVNPLSCVLSDSSNFTESLSIDNQTTENFISCRSSFENSCHVDGEPKIYFLDVMG 248

Query: 846  MVEQLKIMAMDVSFNERPAKNIGNVSGI---LYARYGAMPSISLHDYSIGVGETPLVIQS 1016
            + EQ         FN   +   GNVS I     AR+G +P  +LHDYS  + + PLVI+S
Sbjct: 249  LPEQ---------FNGTSSNFTGNVSEINVMCLARHGTIPLPNLHDYSTNINKAPLVIRS 299

Query: 1017 PKIGRWYVSLLPGKRTIGQRATKDKDIITDVCYSLDWELMKCPVGKAGPNCAWESYMLK 1193
            PK+GRWY ++LP    + +     +D    VCYS++W++++CP+GKAG NC  E YML+
Sbjct: 300  PKVGRWYFTILP--VNLSKEIGGIQDPTIKVCYSMEWKVLECPLGKAGLNCTQERYMLQ 356


>ref|XP_003622497.1| Transmembrane protein 8B [Medicago truncatula]
            gi|355497512|gb|AES78715.1| Transmembrane protein 8B
            [Medicago truncatula]
          Length = 839

 Score =  279 bits (714), Expect = 9e-73
 Identities = 152/342 (44%), Positives = 219/342 (64%), Gaps = 23/342 (6%)
 Frame = +3

Query: 237  FTIWSKYYPPTILKPYDWSYIRVDLPPGFSSVS------VDIEIRFVKKLPRNKVPIICF 398
            FT+ S  YP T L+PYD+ YIRVD+PP FS+VS      VD+++  ++++P++ +PIICF
Sbjct: 48   FTVSSFSYPQTTLRPYDFRYIRVDIPPWFSAVSIALNSDVDLDVSRIERVPKSSLPIICF 107

Query: 399  GFGSPPLPNVSNTSLTVLGPP--TRDSVVDIQVLQ-HVEQCHPLLKNIKLLLTNEQIFSG 569
              GSPPLP+  NTSL        T  S   + +    +EQC P+ KNI + LTNEQI  G
Sbjct: 108  RDGSPPLPDALNTSLKYSHHDSFTYSSSFSLGINGLDMEQCFPMEKNITIKLTNEQISPG 167

Query: 570  VWYIGLFHGIGLARTQPNKIIRGSSLSYSANIRVKGCLTSGVWGQYCNQTVVPLSCVQFE 749
             WYIGLF+GIG ARTQ   IIRG+S S+SANI V+ C  S + G++CN+TV PLSC   +
Sbjct: 168  AWYIGLFNGIGAARTQSRMIIRGTSYSFSANISVEACSNSMMRGEFCNKTVNPLSCTASD 227

Query: 750  ----------SETAENVTTCRNSFE-ICMGFSAPRGYSLDLFGMVEQLKIMAMDVSFNER 896
                        T EN  TC+++FE  C+    P  YS+D+  ++E+L I A ++ FN  
Sbjct: 228  VYNSSKATVMKPTMENAMTCKSNFETFCVQEDVPNLYSVDITNVIEELTITAGNIRFNIT 287

Query: 897  PAKN---IGNVSGILYARYGAMPSISLHDYSIGVGETPLVIQSPKIGRWYVSLLPGKRTI 1067
            P+ N     +V+ + +AR+GA+P+ SL+DY+  + + PLVI+SP +GRWY+S+L    T 
Sbjct: 288  PSSNGSGASDVNLLCFARHGAIPANSLYDYASDLYKAPLVIRSPLVGRWYISILSVNLTK 347

Query: 1068 GQRATKDKDIITDVCYSLDWELMKCPVGKAGPNCAWESYMLK 1193
                T+D D+   VCYSL+ ++++CP+GKAGPNC   S+ L+
Sbjct: 348  MLGETQDHDV--KVCYSLESQMLQCPLGKAGPNCTMSSHALQ 387


>ref|XP_002511889.1| conserved hypothetical protein [Ricinus communis]
            gi|223549069|gb|EEF50558.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 803

 Score =  278 bits (712), Expect = 2e-72
 Identities = 150/351 (42%), Positives = 212/351 (60%), Gaps = 21/351 (5%)
 Frame = +3

Query: 204  SSHNELSTQKRFTIWSKYYPPTILKPYDWSYIRVDLPPGFSSVS------VDIEIRFVKK 365
            S + + S+   FT+ S  YP +++KPYD  YIRVDLPP FSS+S      VD++ + + K
Sbjct: 31   SLNQQFSSYNTFTVSSFRYPKSVVKPYDLRYIRVDLPPWFSSMSIAVESDVDLDAKSISK 90

Query: 366  LPRNKVPIICFGFGSPPLPNVSNTSLTVLGPPTRDSVVDIQVLQHVEQCHPLLKNIKLLL 545
            +P++ +P+ICF  GSPPLP+V N+S   LG              +    H  LKNI    
Sbjct: 91   VPKSTLPMICFRDGSPPLPDVLNSSAIELG--------------NFHCSHVALKNIS--- 133

Query: 546  TNEQIFSGVWYIGLFHGIGLARTQPNKIIRGSSLSYSANIRVKGCLTSGVWGQYCNQTVV 725
                   GVWY+GLF+GIG  RTQ   IIR  S S+SANI V+GC TS +WGQYCNQT+ 
Sbjct: 134  ------PGVWYLGLFNGIGATRTQSKMIIRSPSYSFSANISVEGCTTSTMWGQYCNQTID 187

Query: 726  PLSCVQFESETA------------ENVTTCRNSFEICMGFSAPRGYSLDLFGMVEQLKIM 869
             LSC  + S T             +NV +C+N    C G    + Y LDL G+ E + IM
Sbjct: 188  SLSCSLYGSNTPTENISVASFHTNQNVVSCKNFEASCHGGGELKVYLLDLLGIAELMTIM 247

Query: 870  AMDVSFNERPAKNIGNVSG---ILYARYGAMPSISLHDYSIGVGETPLVIQSPKIGRWYV 1040
            A++VS    P+ N  N SG     + R+GAMPS+ LHDYS  + +TPLVI++PK+GRW++
Sbjct: 248  AVNVSSTTNPSNNNVNASGTNLTYFVRHGAMPSMELHDYSGDINKTPLVIRAPKVGRWFI 307

Query: 1041 SLLPGKRTIGQRATKDKDIITDVCYSLDWELMKCPVGKAGPNCAWESYMLK 1193
            ++LP   ++ +     ++  T VCYS+DW++++CP+GKAG NC  E+Y+L+
Sbjct: 308  AILP---SLSKELGGSQNSSTRVCYSIDWKVLQCPLGKAGLNCTLETYVLE 355


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