BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029787
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB53404.1| RNA polymerase II largest subunit [Nelumbo nucifera]   184   7e-45
gb|ABB53390.1| RNA polymerase II largest subunit [Cissus tuberosa]    184   8e-45
gb|ABB53393.1| RNA polymerase II largest subunit [Gunnera chilen...   184   8e-45
gb|ACD63091.1| RNA polymerase II largest subunit [Saruma henryi]      183   1e-44
gb|ABB53396.1| RNA polymerase II largest subunit [Hibbertia scan...   183   1e-44

>gb|ABB53404.1| RNA polymerase II largest subunit [Nelumbo nucifera]
          Length = 240

 Score =  184 bits (467), Expect = 7e-45
 Identities = 86/117 (73%), Positives = 99/117 (84%)
 Frame = -3

Query: 352 GEDGMDAVWIEYQKLDSLKMEKSKFDKVFKYDFGNENGNPKYILSEHVEDLKTTPDFRSM 173
           GEDGMDAVWIE QKLDSLKM KS+FDKVF+Y+  +EN NP Y+L EHVEDLKT  +FR++
Sbjct: 39  GEDGMDAVWIETQKLDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNV 98

Query: 172 LDAEFEKLESGRYQLGMEIATTGDTLWPVPVNIERLIWNAQKKFKVDLINPSDMHPM 2
            DAE +KLE+ RYQLG EIATTGD  WP+PVN++RLIWNAQK FKVDL  PSDMHPM
Sbjct: 99  FDAEVQKLEADRYQLGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPM 155


>gb|ABB53390.1| RNA polymerase II largest subunit [Cissus tuberosa]
          Length = 240

 Score =  184 bits (466), Expect = 8e-45
 Identities = 85/117 (72%), Positives = 100/117 (85%)
 Frame = -3

Query: 352 GEDGMDAVWIEYQKLDSLKMEKSKFDKVFKYDFGNENGNPKYILSEHVEDLKTTPDFRSM 173
           GEDGMDAVWIE QKLDSLKM+K++FD+VFKY+  +EN NP Y+L EHVEDLKT  +FR++
Sbjct: 39  GEDGMDAVWIESQKLDSLKMKKAEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNV 98

Query: 172 LDAEFEKLESGRYQLGMEIATTGDTLWPVPVNIERLIWNAQKKFKVDLINPSDMHPM 2
            DAE +KLE+ RYQLG EIATTGD  WP+PVN++RLIWNAQK FKVDL  PSDMHPM
Sbjct: 99  FDAEVQKLEADRYQLGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPM 155


>gb|ABB53393.1| RNA polymerase II largest subunit [Gunnera chilensis]
          Length = 240

 Score =  184 bits (466), Expect = 8e-45
 Identities = 85/117 (72%), Positives = 100/117 (85%)
 Frame = -3

Query: 352 GEDGMDAVWIEYQKLDSLKMEKSKFDKVFKYDFGNENGNPKYILSEHVEDLKTTPDFRSM 173
           GEDGMDAVWIE QKLDSLKM+K++FDKVFKY+  +EN NP Y+L EHVEDLKT  +FR++
Sbjct: 39  GEDGMDAVWIESQKLDSLKMKKAEFDKVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNV 98

Query: 172 LDAEFEKLESGRYQLGMEIATTGDTLWPVPVNIERLIWNAQKKFKVDLINPSDMHPM 2
            DAE +KLE+ R+QLG EIATTGD  WP+PVN++RLIWNAQK FKVDL  PSDMHPM
Sbjct: 99  FDAEVQKLEADRFQLGTEIATTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPM 155


>gb|ACD63091.1| RNA polymerase II largest subunit [Saruma henryi]
          Length = 1009

 Score =  183 bits (465), Expect = 1e-44
 Identities = 85/117 (72%), Positives = 99/117 (84%)
 Frame = -3

Query: 352  GEDGMDAVWIEYQKLDSLKMEKSKFDKVFKYDFGNENGNPKYILSEHVEDLKTTPDFRSM 173
            GEDGMDAVWIE QKLDSLKM+K++FDKVF+Y+F + N NP Y+L EHVEDLKT  +FRS+
Sbjct: 805  GEDGMDAVWIESQKLDSLKMKKAEFDKVFRYEFDDANWNPSYMLPEHVEDLKTIREFRSV 864

Query: 172  LDAEFEKLESGRYQLGMEIATTGDTLWPVPVNIERLIWNAQKKFKVDLINPSDMHPM 2
             DAE +KLE+ RYQLG EI TTGD  WP+PVN++RLIWNAQK FKVDL  PSDMHPM
Sbjct: 865  FDAEVQKLEADRYQLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPM 921


>gb|ABB53396.1| RNA polymerase II largest subunit [Hibbertia scandens]
          Length = 240

 Score =  183 bits (465), Expect = 1e-44
 Identities = 85/117 (72%), Positives = 100/117 (85%)
 Frame = -3

Query: 352 GEDGMDAVWIEYQKLDSLKMEKSKFDKVFKYDFGNENGNPKYILSEHVEDLKTTPDFRSM 173
           GEDGMDAVWIE QKLDSLKM+KS+FD+VFKY+  +EN NP Y+LSEHV+DLKT  +FR++
Sbjct: 39  GEDGMDAVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLSEHVDDLKTIREFRNV 98

Query: 172 LDAEFEKLESGRYQLGMEIATTGDTLWPVPVNIERLIWNAQKKFKVDLINPSDMHPM 2
            DAE +KLE+ RYQL  EIATTGD  WP+PVN++RLIWNAQK FKVDL  PSDMHPM
Sbjct: 99  FDAEVQKLEADRYQLATEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPM 155