BLASTX nr result

ID: Cimicifuga21_contig00029764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029764
         (452 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32284.3| unnamed protein product [Vitis vinifera]              131   7e-29
ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated...   131   7e-29
emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]   131   7e-29
ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24

>emb|CBI32284.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score =  131 bits (329), Expect = 7e-29
 Identities = 70/130 (53%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
 Frame = -2

Query: 385 MAENQ--IGKTFPVXXXXXXXXXXXXXXXXXRYWRSFKTSQISNLIFPITSIDFSPLSPH 212
           MAE Q  + +TFPV                 +YW SFK+  I NLI  ITS+ FSP +PH
Sbjct: 1   MAEPQQALSRTFPVKPKLKAKSKKPSKTPESKYWSSFKSHTIPNLISSITSLSFSPATPH 60

Query: 211 DFAAAYSTSVTLYNSQTFEPKSIISSFKDLAYSATYRSDGKLLAAGGQTGLVQVFDLKTR 32
            FAAAYSTS+TL+NS+T EP S ISSFKD+   A++RSDG L+AA   +GLVQVFD+KTR
Sbjct: 61  HFAAAYSTSLTLFNSKTLEPISSISSFKDVVSCASFRSDGLLIAASDHSGLVQVFDVKTR 120

Query: 31  HPIRQLRGHS 2
             +R+LRGH+
Sbjct: 121 TALRKLRGHT 130


>ref|XP_002270535.1| PREDICTED: U3 small nucleolar RNA-associated protein 15 homolog
           [Vitis vinifera]
          Length = 528

 Score =  131 bits (329), Expect = 7e-29
 Identities = 70/130 (53%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
 Frame = -2

Query: 385 MAENQ--IGKTFPVXXXXXXXXXXXXXXXXXRYWRSFKTSQISNLIFPITSIDFSPLSPH 212
           MAE Q  + +TFPV                 +YW SFK+  I NLI  ITS+ FSP +PH
Sbjct: 1   MAEPQQALSRTFPVKPKLKAKSKKPSKTPESKYWSSFKSHTIPNLISSITSLSFSPATPH 60

Query: 211 DFAAAYSTSVTLYNSQTFEPKSIISSFKDLAYSATYRSDGKLLAAGGQTGLVQVFDLKTR 32
            FAAAYSTS+TL+NS+T EP S ISSFKD+   A++RSDG L+AA   +GLVQVFD+KTR
Sbjct: 61  HFAAAYSTSLTLFNSKTLEPISSISSFKDVVSCASFRSDGLLIAASDHSGLVQVFDVKTR 120

Query: 31  HPIRQLRGHS 2
             +R+LRGH+
Sbjct: 121 TALRKLRGHT 130


>emb|CAN67842.1| hypothetical protein VITISV_016665 [Vitis vinifera]
          Length = 570

 Score =  131 bits (329), Expect = 7e-29
 Identities = 70/130 (53%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
 Frame = -2

Query: 385 MAENQ--IGKTFPVXXXXXXXXXXXXXXXXXRYWRSFKTSQISNLIFPITSIDFSPLSPH 212
           MAE Q  + +TFPV                 +YW SFK+  I NLI  ITS+ FSP +PH
Sbjct: 1   MAEPQQALSRTFPVKPKLKAKSKKPSKTPESKYWSSFKSHTIPNLISSITSLSFSPATPH 60

Query: 211 DFAAAYSTSVTLYNSQTFEPKSIISSFKDLAYSATYRSDGKLLAAGGQTGLVQVFDLKTR 32
            FAAAYSTS+TL+NS+T EP S ISSFKD+   A++RSDG L+AA   +GLVQVFD+KTR
Sbjct: 61  HFAAAYSTSLTLFNSKTLEPISSISSFKDVVSCASFRSDGLLIAASDHSGLVQVFDVKTR 120

Query: 31  HPIRQLRGHS 2
             +R+LRGH+
Sbjct: 121 TALRKLRGHT 130


>ref|XP_002301560.1| predicted protein [Populus trichocarpa] gi|222843286|gb|EEE80833.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  119 bits (299), Expect = 2e-25
 Identities = 63/126 (50%), Positives = 81/126 (64%)
 Frame = -2

Query: 379 ENQIGKTFPVXXXXXXXXXXXXXXXXXRYWRSFKTSQISNLIFPITSIDFSPLSPHDFAA 200
           E  I KTFP                  +YW SFK+ QISNLI  I SIDFSP+SPH FAA
Sbjct: 11  EITISKTFPTKPKLKPKAKTPSKTPESKYWSSFKSHQISNLISSIPSIDFSPISPHQFAA 70

Query: 199 AYSTSVTLYNSQTFEPKSIISSFKDLAYSATYRSDGKLLAAGGQTGLVQVFDLKTRHPIR 20
           A S S+TL++SQT  P S I SF D+  S ++R DG L+AA   +GL++VFD+KTR P+R
Sbjct: 71  ANSASLTLFSSQTLSPTSTI-SFSDVVTSCSFRCDGSLIAASDLSGLIRVFDVKTRTPLR 129

Query: 19  QLRGHS 2
           +L+ H+
Sbjct: 130 RLKSHT 135


>ref|XP_002321043.1| predicted protein [Populus trichocarpa] gi|222861816|gb|EEE99358.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  115 bits (289), Expect = 3e-24
 Identities = 62/126 (49%), Positives = 79/126 (62%)
 Frame = -2

Query: 379 ENQIGKTFPVXXXXXXXXXXXXXXXXXRYWRSFKTSQISNLIFPITSIDFSPLSPHDFAA 200
           E  I KTFP                  +YW SFK+ QISNLI  I SIDFSP+SPH FAA
Sbjct: 11  EITISKTFPTKPKLKSKPKTPSKTPESKYWSSFKSHQISNLISSIPSIDFSPISPHHFAA 70

Query: 199 AYSTSVTLYNSQTFEPKSIISSFKDLAYSATYRSDGKLLAAGGQTGLVQVFDLKTRHPIR 20
           A S S+TL++  T  P S ISS  D+  S ++R DG L+AA   +GL++VFD+KTR P+R
Sbjct: 71  ANSASLTLFSPHTLSPASTISS-SDVVTSCSFRCDGSLIAASDLSGLIRVFDVKTRTPLR 129

Query: 19  QLRGHS 2
           +LR H+
Sbjct: 130 RLRSHA 135


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