BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029763
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   548   e-154
ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|2...   538   e-151
ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   528   e-148
ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group] g...   521   e-146
tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea m...   516   e-144

>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  548 bits (1413), Expect = e-154
 Identities = 264/303 (87%), Positives = 278/303 (91%)
 Frame = -2

Query: 911  EKRASWYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSDRTDLHAIVEEQLGHPDWGSY 732
            EKRAS YF MSSEHTMKVAEDLYQ GFISYPRTETD FS+RTDLH IV+EQLGHP WGSY
Sbjct: 305  EKRASRYFHMSSEHTMKVAEDLYQTGFISYPRTETDYFSERTDLHGIVQEQLGHPIWGSY 364

Query: 731  AQRLMDPGAGLWRNPASGGHDDKAHPPIHPTRFSAGESRWTQDHHRLYELVVRHFLACVS 552
            AQRL+DPGAGLWRNP++GGHDDKAHPPIHPT+FSAGES W+QDH RLYELVVRHFLACVS
Sbjct: 365  AQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESGWSQDHQRLYELVVRHFLACVS 424

Query: 551  QPAIGAETTVEIDIAGELFSVSGRVIIAKNYLDVYRFESWGDTTIPNYVFGQQFIPTTLT 372
            QPA+GAET VEIDIAGE FS SGRVIIAKNYLDVYRFESWG + IP YVFGQQFIPTTLT
Sbjct: 425  QPAVGAETIVEIDIAGESFSSSGRVIIAKNYLDVYRFESWGGSMIPTYVFGQQFIPTTLT 484

Query: 371  LDSGVTRPPPLLSEADLLNSMDKAGIGTDATMHDHIKKLLDRLYATKDANTRFSPTNLGE 192
            LDSGVTRPPPLLSEADLLN MDKAGIGTDATMHDHIKKLLDR YATKD+NTRFSPTNLGE
Sbjct: 485  LDSGVTRPPPLLSEADLLNCMDKAGIGTDATMHDHIKKLLDRFYATKDSNTRFSPTNLGE 544

Query: 191  ALVMGYDDMGYELWKPYLRSQMESDMKQVAEGRKRKSEALMECLQQMKACFLDARLKKVK 12
            ALVMGYDDMGYELWKPYLRS ME DMK V+ G KR++E L  CL+QMKACFLDARL KVK
Sbjct: 545  ALVMGYDDMGYELWKPYLRSMMECDMKAVSIGTKRRNEVLTTCLEQMKACFLDARLNKVK 604

Query: 11   LLE 3
            LLE
Sbjct: 605  LLE 607


>ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|222856496|gb|EEE94043.1|
            predicted protein [Populus trichocarpa]
          Length = 910

 Score =  538 bits (1387), Expect = e-151
 Identities = 259/303 (85%), Positives = 275/303 (90%)
 Frame = -2

Query: 911  EKRASWYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSDRTDLHAIVEEQLGHPDWGSY 732
            EKRAS YFRMSSE TMKVAEDLYQAGFISYPRTETDSFS RTDLH IV+E   HP WGSY
Sbjct: 306  EKRASRYFRMSSEQTMKVAEDLYQAGFISYPRTETDSFSSRTDLHTIVQEHQEHPVWGSY 365

Query: 731  AQRLMDPGAGLWRNPASGGHDDKAHPPIHPTRFSAGESRWTQDHHRLYELVVRHFLACVS 552
            AQRL+DPGAGLWRNP++GGHDDKAHPPIHPT+FSAGESRW+QDHHRLYELVVRHFLACVS
Sbjct: 366  AQRLLDPGAGLWRNPSNGGHDDKAHPPIHPTKFSAGESRWSQDHHRLYELVVRHFLACVS 425

Query: 551  QPAIGAETTVEIDIAGELFSVSGRVIIAKNYLDVYRFESWGDTTIPNYVFGQQFIPTTLT 372
            QPA+GAET VEIDIAGE FS SGRVI+AKNYLDVYRFESWGD+ IP Y+ GQQFIP TLT
Sbjct: 426  QPAVGAETVVEIDIAGERFSASGRVILAKNYLDVYRFESWGDSMIPTYLQGQQFIPATLT 485

Query: 371  LDSGVTRPPPLLSEADLLNSMDKAGIGTDATMHDHIKKLLDRLYATKDANTRFSPTNLGE 192
            LDSGVTRPPPLLSEADLL+ MDKAGIGTDATMHDHIKKLLDR Y TKDANTRFSPTNLGE
Sbjct: 486  LDSGVTRPPPLLSEADLLSCMDKAGIGTDATMHDHIKKLLDRFYVTKDANTRFSPTNLGE 545

Query: 191  ALVMGYDDMGYELWKPYLRSQMESDMKQVAEGRKRKSEALMECLQQMKACFLDARLKKVK 12
            ALVMGYDDMGYELWKP LRS ME DMK+V+ G K K+E L  CLQQMKACFLDA++ KVK
Sbjct: 546  ALVMGYDDMGYELWKPNLRSLMECDMKEVSVGNKSKAEVLATCLQQMKACFLDAKVNKVK 605

Query: 11   LLE 3
            LLE
Sbjct: 606  LLE 608


>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
            gi|223533243|gb|EEF34998.1| prokaryotic DNA
            topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  528 bits (1361), Expect = e-148
 Identities = 252/303 (83%), Positives = 271/303 (89%)
 Frame = -2

Query: 911  EKRASWYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSDRTDLHAIVEEQLGHPDWGSY 732
            EKRAS YF MSSE TMKVAEDLYQ+GFISYPRTETD FS RTDLH IV +Q  HP WGSY
Sbjct: 308  EKRASRYFHMSSEQTMKVAEDLYQSGFISYPRTETDGFSSRTDLHTIVRDQQAHPIWGSY 367

Query: 731  AQRLMDPGAGLWRNPASGGHDDKAHPPIHPTRFSAGESRWTQDHHRLYELVVRHFLACVS 552
            AQRL+DPG GLWRNP++GGHDDKAHPPIHPT+FS GE+ W+QDHHR+YELVVRHFLACVS
Sbjct: 368  AQRLLDPGTGLWRNPSTGGHDDKAHPPIHPTKFSPGETGWSQDHHRVYELVVRHFLACVS 427

Query: 551  QPAIGAETTVEIDIAGELFSVSGRVIIAKNYLDVYRFESWGDTTIPNYVFGQQFIPTTLT 372
            QPA+GAETTVEIDIAGE FS SGRVI+AKNYLDVYRFESWG + IP YV GQQF+PTTLT
Sbjct: 428  QPAVGAETTVEIDIAGEQFSASGRVILAKNYLDVYRFESWGGSMIPTYVHGQQFMPTTLT 487

Query: 371  LDSGVTRPPPLLSEADLLNSMDKAGIGTDATMHDHIKKLLDRLYATKDANTRFSPTNLGE 192
            LDSGVTRPPPLLSE+DLL+ MDKAGIGTDATMHDHIKKLLDR YATKDANTRFSPTNLGE
Sbjct: 488  LDSGVTRPPPLLSESDLLSCMDKAGIGTDATMHDHIKKLLDRFYATKDANTRFSPTNLGE 547

Query: 191  ALVMGYDDMGYELWKPYLRSQMESDMKQVAEGRKRKSEALMECLQQMKACFLDARLKKVK 12
            ALVMGYDDMGYELWKP LRS ME DMK+V+ G K K+E L  CLQQMK CFLDAR+ KVK
Sbjct: 548  ALVMGYDDMGYELWKPNLRSMMEYDMKEVSMGHKSKAEVLETCLQQMKTCFLDARINKVK 607

Query: 11   LLE 3
            LLE
Sbjct: 608  LLE 610


>ref|NP_001173278.1| Os03g0165000 [Oryza sativa Japonica Group]
            gi|255674230|dbj|BAH92006.1| Os03g0165000 [Oryza sativa
            Japonica Group]
          Length = 928

 Score =  521 bits (1342), Expect = e-146
 Identities = 244/303 (80%), Positives = 272/303 (89%)
 Frame = -2

Query: 911  EKRASWYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSDRTDLHAIVEEQLGHPDWGSY 732
            +KRAS YFRMSSEHTMKVAE+LYQAGFISYPRTETD+FS  TDLH+IV EQ+ HP+WG+Y
Sbjct: 315  QKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHSIVHEQVAHPNWGTY 374

Query: 731  AQRLMDPGAGLWRNPASGGHDDKAHPPIHPTRFSAGESRWTQDHHRLYELVVRHFLACVS 552
            AQRL+DP A LWRNP++GGHDDKAHPPIHPT+FSAGE+ WT +H +LYELVVRHFLAC S
Sbjct: 375  AQRLLDPEARLWRNPSNGGHDDKAHPPIHPTKFSAGETNWTDNHKKLYELVVRHFLACCS 434

Query: 551  QPAIGAETTVEIDIAGELFSVSGRVIIAKNYLDVYRFESWGDTTIPNYVFGQQFIPTTLT 372
            QPA+GAETTVEIDIAGE F+ SGRV++AKNYLDVYRF+SWG T +P Y+ GQQF+PTTLT
Sbjct: 435  QPAVGAETTVEIDIAGEQFNASGRVVLAKNYLDVYRFDSWGGTLLPTYIIGQQFVPTTLT 494

Query: 371  LDSGVTRPPPLLSEADLLNSMDKAGIGTDATMHDHIKKLLDRLYATKDANTRFSPTNLGE 192
            LDSG+TRPPPLL+EADLL  MDKAGIGTDATMHDHIKKLLDR YATKDANTRFSPTNLGE
Sbjct: 495  LDSGMTRPPPLLAEADLLGCMDKAGIGTDATMHDHIKKLLDRCYATKDANTRFSPTNLGE 554

Query: 191  ALVMGYDDMGYELWKPYLRSQMESDMKQVAEGRKRKSEALMECLQQMKACFLDARLKKVK 12
            ALVMGYD+MGYELWKPYLRS ME+DMK V+ G K KSE L  CLQQMKACFLDAR  KVK
Sbjct: 555  ALVMGYDEMGYELWKPYLRSMMEADMKSVSIGTKSKSEVLENCLQQMKACFLDARANKVK 614

Query: 11   LLE 3
            L +
Sbjct: 615  LFD 617


>tpg|DAA43538.1| TPA: hypothetical protein ZEAMMB73_751776 [Zea mays]
          Length = 915

 Score =  516 bits (1329), Expect = e-144
 Identities = 245/303 (80%), Positives = 269/303 (88%)
 Frame = -2

Query: 911  EKRASWYFRMSSEHTMKVAEDLYQAGFISYPRTETDSFSDRTDLHAIVEEQLGHPDWGSY 732
            +KRAS YFRMSSEHTMKVAE+LYQAGFISYPRTETD+FS  TDLHAIV EQ+ HP WG+Y
Sbjct: 312  QKRASRYFRMSSEHTMKVAEELYQAGFISYPRTETDNFSPNTDLHAIVREQVNHPVWGAY 371

Query: 731  AQRLMDPGAGLWRNPASGGHDDKAHPPIHPTRFSAGESRWTQDHHRLYELVVRHFLACVS 552
            AQRL++P A LWRNP++GGHDDKAHPPIHPT+FS GE  W+ DH RLYE VVRHFLAC S
Sbjct: 372  AQRLLNPEARLWRNPSNGGHDDKAHPPIHPTKFSEGERNWSPDHTRLYEFVVRHFLACCS 431

Query: 551  QPAIGAETTVEIDIAGELFSVSGRVIIAKNYLDVYRFESWGDTTIPNYVFGQQFIPTTLT 372
            QPA+GAETTVEIDIAGE F+ SGRVI+AKNYLDVYRF+SWG T +P Y  GQQF+PTTLT
Sbjct: 432  QPAVGAETTVEIDIAGEQFNASGRVILAKNYLDVYRFDSWGGTLLPTYNIGQQFVPTTLT 491

Query: 371  LDSGVTRPPPLLSEADLLNSMDKAGIGTDATMHDHIKKLLDRLYATKDANTRFSPTNLGE 192
            LDSGVTRPPPLL+EADLL+ MDKAGIGTDATMHDHIKKLLDR YATKD NTRFSPTNLGE
Sbjct: 492  LDSGVTRPPPLLAEADLLSCMDKAGIGTDATMHDHIKKLLDRCYATKDENTRFSPTNLGE 551

Query: 191  ALVMGYDDMGYELWKPYLRSQMESDMKQVAEGRKRKSEALMECLQQMKACFLDARLKKVK 12
            ALVMGYD+MGYELWKPYLRS ME+DMK V+ G K KSE L  CLQQMKACFLDAR+KK K
Sbjct: 552  ALVMGYDEMGYELWKPYLRSMMEADMKSVSVGTKSKSEVLESCLQQMKACFLDARVKKAK 611

Query: 11   LLE 3
            LL+
Sbjct: 612  LLD 614