BLASTX nr result

ID: Cimicifuga21_contig00029755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029755
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA53464.1| TPA: hypothetical protein ZEAMMB73_471175 [Zea m...    89   4e-16
ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-...    89   4e-16
emb|CBI30553.3| unnamed protein product [Vitis vinifera]               89   4e-16
emb|CAN68967.1| hypothetical protein VITISV_020721 [Vitis vinifera]    89   4e-16
ref|XP_002457366.1| hypothetical protein SORBIDRAFT_03g006120 [S...    89   5e-16

>tpg|DAA53464.1| TPA: hypothetical protein ZEAMMB73_471175 [Zea mays]
           gi|414876334|tpg|DAA53465.1| TPA: hypothetical protein
           ZEAMMB73_471175 [Zea mays]
          Length = 700

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 44/110 (40%), Positives = 65/110 (59%)
 Frame = +1

Query: 1   ALITCCGHYQLDVTKLGSGDNMIDDICNVKDKSVAAQQYVVSHYIDFSCHHKDMIRIMTH 180
           AL+TC G    D +     D +++D+C        A+ Y VS YID SCH KDM+R +T+
Sbjct: 392 ALVTCYGEETFDRSNFN--DCLLNDVCKTMSGYDIARDYFVSKYIDPSCHPKDMVRRLTY 449

Query: 181 PYLRRCALLWKLLEFSTSTSFFDRSH*WDXXXXXXXNDLLERTNILSMDL 330
           PYLRRCALLW+LL  S ++  +D S+ W+       N   + ++ L+M+L
Sbjct: 450 PYLRRCALLWELLRSSATSPLYDGSNIWEGSHLYLSNSTQDDSSSLAMEL 499


>ref|XP_002270537.2| PREDICTED: E3 ubiquitin-protein ligase UBR2-like [Vitis vinifera]
          Length = 2048

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/113 (46%), Positives = 67/113 (59%)
 Frame = +1

Query: 1    ALITCCGHYQLDVTKLGSGDNMIDDICNVKDKSVAAQQYVVSHYIDFSCHHKDMIRIMTH 180
            A+IT CG  Q  +  LG  D +I DI N+  KS  A  Y VS YID SC+ KD+IR ++ 
Sbjct: 1739 AIITYCGKQQCKINGLGFQDCLITDISNIVGKSGFAPLYFVSSYIDPSCNIKDVIRSLSF 1798

Query: 181  PYLRRCALLWKLLEFSTSTSFFDRSH*WDXXXXXXXNDLLERTNILSMDLKEV 339
            PYLRRCALLWKLL  S +  F DR   +D       +D+++ TN   +DL  V
Sbjct: 1799 PYLRRCALLWKLLNSSITAPFCDRPLVFD-RPFNAIDDMMDCTNGALLDLIHV 1850


>emb|CBI30553.3| unnamed protein product [Vitis vinifera]
          Length = 1254

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/113 (46%), Positives = 67/113 (59%)
 Frame = +1

Query: 1    ALITCCGHYQLDVTKLGSGDNMIDDICNVKDKSVAAQQYVVSHYIDFSCHHKDMIRIMTH 180
            A+IT CG  Q  +  LG  D +I DI N+  KS  A  Y VS YID SC+ KD+IR ++ 
Sbjct: 945  AIITYCGKQQCKINGLGFQDCLITDISNIVGKSGFAPLYFVSSYIDPSCNIKDVIRSLSF 1004

Query: 181  PYLRRCALLWKLLEFSTSTSFFDRSH*WDXXXXXXXNDLLERTNILSMDLKEV 339
            PYLRRCALLWKLL  S +  F DR   +D       +D+++ TN   +DL  V
Sbjct: 1005 PYLRRCALLWKLLNSSITAPFCDRPLVFD-RPFNAIDDMMDCTNGALLDLIHV 1056


>emb|CAN68967.1| hypothetical protein VITISV_020721 [Vitis vinifera]
          Length = 355

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 52/113 (46%), Positives = 67/113 (59%)
 Frame = +1

Query: 1   ALITCCGHYQLDVTKLGSGDNMIDDICNVKDKSVAAQQYVVSHYIDFSCHHKDMIRIMTH 180
           A+IT CG  Q  +  LG  D +I DI N+  KS  A  Y VS YID SC+ KD+IR ++ 
Sbjct: 130 AIITYCGKQQCKINGLGFQDCLITDISNIVGKSGFAPLYFVSSYIDPSCNIKDVIRSLSF 189

Query: 181 PYLRRCALLWKLLEFSTSTSFFDRSH*WDXXXXXXXNDLLERTNILSMDLKEV 339
           PYLRRCALLWKLL  S +  F DR   +D       +D+++ TN   +DL  V
Sbjct: 190 PYLRRCALLWKLLNSSITAPFCDRPLVFD-RPFNAIDDMMDCTNGALLDLIHV 241


>ref|XP_002457366.1| hypothetical protein SORBIDRAFT_03g006120 [Sorghum bicolor]
            gi|241929341|gb|EES02486.1| hypothetical protein
            SORBIDRAFT_03g006120 [Sorghum bicolor]
          Length = 2033

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 44/110 (40%), Positives = 65/110 (59%)
 Frame = +1

Query: 1    ALITCCGHYQLDVTKLGSGDNMIDDICNVKDKSVAAQQYVVSHYIDFSCHHKDMIRIMTH 180
            ALITC G    D +     D +++D+C        A++Y VS YID  CH KDM+R +T+
Sbjct: 1762 ALITCYGEETFDRSNFN--DCLLNDVCKTMSGFDVAREYFVSKYIDPCCHPKDMVRRLTY 1819

Query: 181  PYLRRCALLWKLLEFSTSTSFFDRSH*WDXXXXXXXNDLLERTNILSMDL 330
            PYLRRCALLW+LL  S ++  +D S+ W+       N   + ++ L+M+L
Sbjct: 1820 PYLRRCALLWELLRSSATSPLYDGSNIWEGSHLYLSNSTQDGSSSLAMEL 1869


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