BLASTX nr result

ID: Cimicifuga21_contig00029694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029694
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526891.1| serine-threonine protein kinase, plant-type,...    47   6e-08
ref|XP_002526889.1| serine-threonine protein kinase, plant-type,...    47   1e-07
emb|CBI17206.3| unnamed protein product [Vitis vinifera]               44   2e-07
ref|XP_003545233.1| PREDICTED: probable LRR receptor-like serine...    41   2e-07
ref|XP_003545235.1| PREDICTED: probable LRR receptor-like serine...    42   3e-07

>ref|XP_002526891.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223533790|gb|EEF35522.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 1013

 Score = 46.6 bits (109), Expect(2) = 6e-08
 Identities = 22/48 (45%), Positives = 35/48 (72%)
 Frame = +3

Query: 6    LSLHDFSKMALSQGLTDIIDMSLLPEETSNQAAKLKECLNSIIRIGVA 149
            L+LH+F +MAL + + DI+D  LLPEE  N   +++ CL S++RIG++
Sbjct: 934  LNLHNFCRMALPERVRDIVDPLLLPEE--NTGERVQNCLASVLRIGLS 979



 Score = 35.0 bits (79), Expect(2) = 6e-08
 Identities = 13/29 (44%), Positives = 21/29 (72%)
 Frame = +2

Query: 224  RIGVACSAELMTERMDIEDVIKELHSINN 310
            RIG++CS E   +RM+I + ++ELH + N
Sbjct: 975  RIGLSCSTETPRDRMEIRNAVRELHLVKN 1003


>ref|XP_002526889.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223533788|gb|EEF35520.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 891

 Score = 47.0 bits (110), Expect(2) = 1e-07
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = +2

Query: 224 RIGVACSAELMTERMDIEDVIKELHSINNFLLQ 322
           RIGV+CSAEL +ERM+I+DVIKEL +  N LLQ
Sbjct: 847 RIGVSCSAELPSERMNIKDVIKELCAAKNMLLQ 879



 Score = 33.5 bits (75), Expect(2) = 1e-07
 Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
 Frame = +3

Query: 3   GLSLHDFSKMALSQGLTDIIDMSLLPEET------SNQ---AAKLKECLNSIIRIGVA 149
           G SLH+  K A  + + DI+D  LL +        SNQ     ++ ECL S +RIGV+
Sbjct: 794 GFSLHNTCKRASPENVRDIVDSYLLQQSVEGSDSISNQHGMNGQMWECLVSFLRIGVS 851


>emb|CBI17206.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score = 43.5 bits (101), Expect(2) = 2e-07
 Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 9/58 (15%)
 Frame = +3

Query: 3   GLSLHDFSKMALSQGLTDIIDMSLLPE--ETSNQAA-------KLKECLNSIIRIGVA 149
           GLSLH FSKMAL + + +I D +L+ E  E  N  A       ++++CL SI RIGVA
Sbjct: 731 GLSLHSFSKMALPERVMEIADSTLVGESGEAINNIANHGDMEGRMQDCLASIARIGVA 788



 Score = 36.2 bits (82), Expect(2) = 2e-07
 Identities = 19/34 (55%), Positives = 22/34 (64%)
 Frame = +2

Query: 224 RIGVACSAELMTERMDIEDVIKELHSINNFLLQV 325
           RIGVACS E    RMDI+DV+ EL+ I    L V
Sbjct: 784 RIGVACSEESPGGRMDIKDVVMELNIIKEVFLGV 817


>ref|XP_003545233.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Glycine max]
          Length = 948

 Score = 41.2 bits (95), Expect(2) = 2e-07
 Identities = 21/33 (63%), Positives = 24/33 (72%)
 Frame = +2

Query: 224  RIGVACSAELMTERMDIEDVIKELHSINNFLLQ 322
            RIGV+CSAEL   RMDI+DVI EL +I   L Q
Sbjct: 916  RIGVSCSAELPVRRMDIKDVIMELEAIKQKLPQ 948



 Score = 38.5 bits (88), Expect(2) = 2e-07
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
 Frame = +3

Query: 3    GLSLHDFSKMALSQGLTDIIDMSLL----PEETSNQAAKLKECLNSIIRIGVA 149
            GLSLH F +M + + +T+I+D  LL     E T      ++ECL +  RIGV+
Sbjct: 868  GLSLHKFCQMTIPEEITEIVDSRLLVPINKEGTRVIETNIRECLVAFARIGVS 920


>ref|XP_003545235.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Glycine max]
          Length = 952

 Score = 42.0 bits (97), Expect(2) = 3e-07
 Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 7/54 (12%)
 Frame = +3

Query: 6    LSLHDFSKMALSQGLTDIIDMSLLPEETSNQAAK-------LKECLNSIIRIGV 146
            LSLH F +MA+ +G+T+I+D  LL   T+ +  +       ++ECL S  RIG+
Sbjct: 870  LSLHKFCQMAIPEGITEIVDSRLLVPTTTEEGTRVRVMERNIRECLVSFARIGL 923



 Score = 37.4 bits (85), Expect(2) = 3e-07
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = +2

Query: 224  RIGVACSAELMTERMDIEDVIKELHSINNFL 316
            RIG+ CSAEL  +R+ I+DVI ELH I   L
Sbjct: 920  RIGLTCSAELPVQRISIKDVIVELHLIKKKL 950


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