BLASTX nr result

ID: Cimicifuga21_contig00029691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00029691
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533570.1| Ocs element-binding factor, putative [Ricinu...    64   2e-08
emb|CAN62264.1| hypothetical protein VITISV_018458 [Vitis vinifera]    59   4e-07
ref|XP_002320010.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002310886.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002533570.1| Ocs element-binding factor, putative [Ricinus communis]
           gi|223526547|gb|EEF28805.1| Ocs element-binding factor,
           putative [Ricinus communis]
          Length = 201

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
 Frame = -2

Query: 339 RDMANQLELINYRCHVVKRDNDRLSSESTVLSRRLSDIRRFLIFRQLQHFSNTLPALNTV 160
           R+M N+L  + Y    V+R+ND+L SE ++L ++LS+IR+ L+FRQLQ F++  P  NTV
Sbjct: 131 REMTNRLRFVLYHWQSVRRENDQLRSEHSMLRQKLSNIRQILMFRQLQQFTSAWPCNNTV 190

Query: 159 -NEQVP 145
             EQ+P
Sbjct: 191 TTEQIP 196


>emb|CAN62264.1| hypothetical protein VITISV_018458 [Vitis vinifera]
          Length = 297

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
 Frame = -2

Query: 339 RDMANQLELINYRCHVVKRDNDRLSSESTVLSRRLSDIRRFLIFRQLQ-HFSNTLP---A 172
           R++ N+L    Y  H+V  DN +L SE+ +L R+LS+ R+ L+FRQLQ   S+  P    
Sbjct: 186 RELTNRLRSFTYHSHLVDSDNVQLRSEAIILRRKLSEFRQILVFRQLQRQISSAWPCNSV 245

Query: 171 LNTVNEQVPSLI 136
             +VNEQ PSLI
Sbjct: 246 TTSVNEQTPSLI 257


>ref|XP_002320010.1| predicted protein [Populus trichocarpa] gi|222860783|gb|EEE98325.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 6/74 (8%)
 Frame = -2

Query: 339 RDMANQLELINYRCHVVKRDNDRLSSESTVLSRRLSDIRRFLIFRQLQHFSNTLPALN-- 166
           R++ N+L  + Y  H V+ D DRL SE + L ++LSDIR+ L+ RQLQ  ++  P  N  
Sbjct: 122 RELTNRLRFVLYHSHGVRTDYDRLRSEYSTLRKKLSDIRQILMMRQLQELTSAWPCNNMI 181

Query: 165 ---TVNEQV-PSLI 136
              T  EQ+ PSLI
Sbjct: 182 TTTTTTEQIAPSLI 195


>ref|XP_002310886.1| predicted protein [Populus trichocarpa] gi|222853789|gb|EEE91336.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/61 (37%), Positives = 41/61 (67%)
 Frame = -2

Query: 339 RDMANQLELINYRCHVVKRDNDRLSSESTVLSRRLSDIRRFLIFRQLQHFSNTLPALNTV 160
           R++ N+L ++ Y CH V+ +ND L SE ++L ++LS+  + L+ RQLQ F++  P  N +
Sbjct: 91  RELTNRLRIVLYHCHSVRTENDWLRSEYSMLRKKLSETSQILMMRQLQQFTSAWPCNNII 150

Query: 159 N 157
           +
Sbjct: 151 S 151


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